RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 NEFHP12036 1026 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 PHBP35232 272 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 UCP2P55851 309 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 BTG1P62324 171 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 EGR3Q06889 387 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 C1DQ13901 141 aaKnown RBP11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 GPR157Q5UAW9 335 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 CARD17Q5XLA6 110 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 ZNF774Q6NX45 483 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 FRMD7Q6ZUT3 714 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 SKA3Q8IX90 412 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 NATD1Q8N6N6 113 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 ICA1LQ8NDH6 482 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 SLC25A36Q96CQ1 311 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 COQ8BQ96D53 544 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 MARS2Q96GW9 593 aaKnown RBP11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 FOXB1Q99853 325 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 MECRQ9BV79 373 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 PTDSS2Q9BVG9 487 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 BCL2L14Q9BZR8 327 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 TUBB1Q9H4B7 451 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 CDH20Q9HBT6 801 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 TMEM106BQ9NUM4 274 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 ATAD3AQ9NVI7 634 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 RNF103-CHMP3A0A140T963 221 aa11.57□□□□□ -0.56
NKX3-1-202ENST00000523261 KIR2DS1A0A191URI9 304 aa11.57□□□□□ -0.56
NKX3-1-202ENST00000523261 AKAP8O43823 692 aaKnown RBP11.57□□□□□ -0.56
NKX3-1-202ENST00000523261 XPNPEP2O43895 674 aa11.57□□□□□ -0.56
NKX3-1-202ENST00000523261 FZD7O75084 574 aa11.57□□□□□ -0.56
NKX3-1-202ENST00000523261 TSPAN9O75954 239 aa11.57□□□□□ -0.56
NKX3-1-202ENST00000523261 AHSA1O95433 338 aa11.57□□□□□ -0.56
NKX3-1-202ENST00000523261 AGR2O95994 175 aa11.57□□□□□ -0.56
NKX3-1-202ENST00000523261 WNT2P09544 360 aa11.57□□□□□ -0.56
NKX3-1-202ENST00000523261 HERPUD1Q15011 391 aa11.57□□□□□ -0.56
NKX3-1-202ENST00000523261 LARS2Q15031 903 aaKnown RBP11.57□□□□□ -0.56
NKX3-1-202ENST00000523261 GALNTL6Q49A17 601 aa11.57□□□□□ -0.56
NKX3-1-202ENST00000523261 FOXB2Q5VYV0 432 aa11.57□□□□□ -0.56
NKX3-1-202ENST00000523261 ZNF283Q8N7M2 679 aa11.57□□□□□ -0.56
NKX3-1-202ENST00000523261 LRR1Q96L50 414 aa11.57□□□□□ -0.56
NKX3-1-202ENST00000523261 SSBP3Q9BWW4 388 aaPredicted RBP11.57□□□□□ -0.56
NKX3-1-202ENST00000523261 FUT8Q9BYC5 575 aa11.57□□□□□ -0.56
NKX3-1-202ENST00000523261 NANOGQ9H9S0 305 aa11.57□□□□□ -0.56
NKX3-1-202ENST00000523261 TRIM33Q9UPN9 1127 aa11.57□□□□□ -0.56
NKX3-1-202ENST00000523261 ZNF816-ZNF321PA0A0X1KG74 233 aa11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 LOC102725191A0A1B0GVB3 256 aa11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 CEACAM18A8MTB9 384 aa11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 CD55P08174 381 aa11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 THRBP10828 461 aa11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 C2orf54Q08AI8 447 aa11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 BST1Q10588 318 aa11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 PTGR1Q14914 329 aa11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 MRPL2Q5T653 305 aaKnown RBP11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 WBP2NLQ6ICG8 309 aa11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 TNFAIP8L2Q6P589 184 aaPredicted RBP11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 GDPGP1Q6ZNW5 385 aa11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 RNF165Q6ZSG1 346 aa11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 Q6ZTK2 550 aa11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 CADM2Q8N3J6 435 aa11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 PNPT1Q8TCS8 783 aaKnown RBP11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 STK35Q8TDR2 534 aa11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 THOC1Q96FV9 657 aaKnown RBP11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 SIGLEC11Q96RL6 698 aa11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 EMC6Q9BV81 110 aa11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 ULBP2Q9BZM5 246 aa11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 FN3KRPQ9HA64 309 aa11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 B3GAT2Q9NPZ5 323 aa11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 NINJ2Q9NZG7 142 aa11.56□□□□□ -0.56
NKX3-1-202ENST00000523261 A0A096LPI6 279 aa11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 PLSCR5A0PG75 271 aa11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 TMEM114B3SHH9 223 aa11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 LINC00032P0C843 101 aa11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 GKN3PP0CG01 181 aa11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 GTF2E2P29084 291 aaKnown RBP11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 MPV17P39210 176 aa11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 MDH2P40926 338 aaKnown RBP11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 ACAA2P42765 397 aaKnown RBP11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 IER3P46695 156 aa11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 RPS5P46782 204 aaKnown RBP11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 FGF12P61328 243 aa11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 EGR4Q05215 589 aa11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 GPAT3Q53EU6 434 aa11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 PIWIL3Q7Z3Z3 882 aaKnown RBP11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 ZNF440Q8IYI8 595 aa11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 CLECL1Q8IZS7 167 aa11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 KRTCAP2Q8N6L1 136 aa11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 OR1J1Q8NGS3 322 aa11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 IPCEF1Q8WWN9 437 aaPredicted RBP11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 ITPKCQ96DU7 683 aa11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 DUSP26Q9BV47 211 aa11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 SLC38A1Q9H2H9 487 aa11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 TOR3AQ9H497 397 aa11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 ZNF180Q9UJW8 692 aa11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 PRDM4Q9UKN5 801 aa11.55□□□□□ -0.56
NKX3-1-202ENST00000523261 G3V2L1 256 aa11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 M0R082 166 aa11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 AIM2O14862 343 aa11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 SNRPAP09012 282 aaKnown RBP11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 HLA-DOBP13765 273 aa11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 RPS4Y1P22090 263 aaKnown RBP11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 PAFAH1B1P43034 410 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms