RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 IGKV3-15P01624 115 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 IGHV2-5P01817 119 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 TFPIP10646 304 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 UBL4AP11441 157 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 HSD3B1P14060 373 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 EFNA1P20827 205 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-211ENST00000522802 FPR3P25089 353 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 TYK2P29597 1187 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 LCN1P31025 176 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 SPRP35270 261 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-211ENST00000522802 LCN2P80188 198 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 POU3F1Q03052 451 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-211ENST00000522802 C2orf80Q0P641 193 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 MERTKQ12866 999 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 HNRNPA0Q13151 305 aaKnown RBP5.35□□□□□ -1.55
VPS13B-211ENST00000522802 FAM83EQ2M2I3 478 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 VPS26BQ4G0F5 336 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 SLC9B1Q4ZJI4 515 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 SPIN4Q56A73 249 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 ARMCX4Q5H9R4 360 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 FAM71E1Q6IPT2 247 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 C11orf87Q6NUJ2 197 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 LRIG3Q6UXM1 1119 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 ZNF614Q8N883 585 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 NOA1Q8NC60 698 aaKnown RBP5.35□□□□□ -1.55
VPS13B-211ENST00000522802 OR4F15Q8NGB8 312 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 OR6Y1Q8NGX8 325 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 OR5W2Q8NH69 310 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 CDKL2Q92772 493 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 SHCBP1LQ9BZQ2 653 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 WDR12Q9GZL7 423 aaKnown RBP5.35□□□□□ -1.55
VPS13B-211ENST00000522802 NOX3Q9HBY0 568 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 OBP2BQ9NPH6 170 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 NMRK1Q9NWW6 199 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 GRID1Q9ULK0 1009 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 FZR1Q9UM11 496 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 POLR3HQ9Y535 204 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-211ENST00000522802 MMP24Q9Y5R2 645 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 TANC2Q9HCD6 1990 aa5.35□□□□□ -1.55
VPS13B-211ENST00000522802 IGHV3OR16-10A0A075B7F0 116 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 A0A096LPK6 155 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 NPIPB9F8W1W9 429 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 STX16-NPEPL1H3BU86 382 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 GTPBP1O00178 669 aaKnown RBP5.34□□□□□ -1.55
VPS13B-211ENST00000522802 STX16O14662 325 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 TIMM23O14925 209 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 PIP5K1BO14986 540 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 SCAMP2O15127 329 aaKnown RBP5.34□□□□□ -1.55
VPS13B-211ENST00000522802 PLXNB1O43157 2135 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 ZNF264O43296 627 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 BCAS1O75363 584 aaPredicted RBP5.34□□□□□ -1.55
VPS13B-211ENST00000522802 PMS2P2O95744 297 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 IFI6P09912 130 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 ALOX5P09917 674 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 TMEM225BP0DP42 221 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 BCKDHAP12694 445 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 MAGEB1P43366 347 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 RAG2P55895 527 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 UBE2NP61088 152 aaKnown RBP5.34□□□□□ -1.55
VPS13B-211ENST00000522802 H3F3AP84243 136 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 NPRL3Q12980 569 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 CBFBQ13951 182 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 SLC17A1Q14916 467 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 ALKBH6Q3KRA9 238 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 VAX1Q5SQQ9 334 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 OTUD3Q5T2D3 398 aaPredicted RBP5.34□□□□□ -1.55
VPS13B-211ENST00000522802 KPRPQ5T749 579 aaPredicted RBP5.34□□□□□ -1.55
VPS13B-211ENST00000522802 C1QTNF12Q5T7M4 302 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 GRTP1Q5TC63 336 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 KLC3Q6P597 504 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 BCDIN3DQ7Z5W3 292 aaKnown RBP5.34□□□□□ -1.55
VPS13B-211ENST00000522802 LRP11Q86VZ4 500 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 WDFY1Q8IWB7 410 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 ZIC4Q8N9L1 334 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 DEFB108BQ8NET1 73 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 FAM110DQ8TAY7 271 aaPredicted RBP5.34□□□□□ -1.55
VPS13B-211ENST00000522802 ACTRT1Q8TDG2 376 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 PYROXD1Q8WU10 500 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 BCL2L2Q92843 193 aaPredicted RBP5.34□□□□□ -1.55
VPS13B-211ENST00000522802 RAB39BQ96DA2 213 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 ZHX1-C8orf76Q96EF9 292 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 EGLN2Q96KS0 407 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 ANKRD27Q96NW4 1050 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 ZNF385AQ96PM9 386 aaKnown RBP5.34□□□□□ -1.55
VPS13B-211ENST00000522802 KCNA7Q96RP8 456 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 THUMPD3Q9BV44 507 aaKnown RBP5.34□□□□□ -1.55
VPS13B-211ENST00000522802 CCDC106Q9BWC9 280 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 ZNF416Q9BWM5 594 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 CTPS2Q9NRF8 586 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 GAR1Q9NY12 217 aaKnown RBP5.34□□□□□ -1.55
VPS13B-211ENST00000522802 TAS2R7Q9NYW3 318 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 CHRNA9Q9UGM1 479 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 TAGLN3Q9UI15 199 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 NUP50Q9UKX7 468 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 DTNAQ9Y4J8 743 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 CACNG2Q9Y698 323 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 KCNE3Q9Y6H6 103 aa5.34□□□□□ -1.55
VPS13B-211ENST00000522802 CCDC189A1A4V9 331 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 A8MT66 165 aa5.33□□□□□ -1.56
VPS13B-211ENST00000522802 TRIM49D1C9J1S8 452 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms