RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 PRSS37A4D1T9 235 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 A6NIZ1 184 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 CD8B2A6NJW9 211 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 FIGNL2A6NMB9 653 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 FAM171A2A8MVW0 826 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 PRR23D1E9PI22 279 aaPredicted RBP11.87□□□□□ -0.51
CLK4-210ENST00000522136 DCTN6O00399 190 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 SMNDC1O75940 238 aaKnown RBP eCLIP11.87□□□□□ -0.516e-6■■■■□ 20
CLK4-210ENST00000522136 ZNF432O94892 652 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 PRB1P04280 392 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 YES1P07947 543 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 PRR23D2P0DMB1 279 aaPredicted RBP11.87□□□□□ -0.51
CLK4-210ENST00000522136 NUDT6P53370 316 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 RAP1BP61224 184 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 RAP1AP62834 184 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 FMODQ06828 376 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 AADACL4Q5VUY2 407 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 GTF2IRD2BQ6EKJ0 949 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 B3GLCTQ6Y288 498 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 AAED1Q7RTV5 226 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 GTF2IRD2Q86UP8 949 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 ZNRF4Q8WWF5 429 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 INTS12Q96CB8 462 aaKnown RBP11.87□□□□□ -0.51
CLK4-210ENST00000522136 SLC25A44Q96H78 314 aaPredicted RBP11.87□□□□□ -0.51
CLK4-210ENST00000522136 ZNF582Q96NG8 517 aaPredicted RBP11.87□□□□□ -0.51
CLK4-210ENST00000522136 KCNK17Q96T54 332 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 MRPL13Q9BYD1 178 aaKnown RBP11.87□□□□□ -0.51
CLK4-210ENST00000522136 OR51V1Q9H2C8 321 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 RERGLQ9H628 205 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 BCO1Q9HAY6 547 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 SRA1Q9HD15 236 aaKnown RBP11.87□□□□□ -0.51
CLK4-210ENST00000522136 AMBNQ9NP70 447 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 LRCH1Q9Y2L9 728 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 NOSIPQ9Y314 301 aaKnown RBP11.87□□□□□ -0.51
CLK4-210ENST00000522136 SLC22A23A1A5C7 686 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 GPR171O14626 319 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 TOXO94900 526 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 PGA4P0DJD7 388 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 PGA3P0DJD8 388 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 FCGR2AP12318 317 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 RBPJQ06330 500 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 PHYHD1Q5SRE7 291 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 ADCK1Q86TW2 530 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 TMEM123Q8N131 208 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 ST6GALNAC3Q8NDV1 305 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 OR51L1Q8NGJ5 315 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 ZNF566Q969W8 418 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 NUAK2Q9H093 628 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 CLN6Q9NWW5 311 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 ASB6Q9NWX5 421 aa11.87□□□□□ -0.51
CLK4-210ENST00000522136 INTS1Q8N201 2190 aaKnown RBP11.86□□□□□ -0.51
CLK4-210ENST00000522136 ZFYVE26Q68DK2 2539 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 IGKV1D-43A0A0B4J1Z2 117 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 ZNF724A8MTY0 619 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 XPNPEP2O43895 674 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 MPZL2O60487 215 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 RENP00797 406 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 IGHV3-9P01782 118 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 IGHG1P01857 330 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 AGTR1P30556 359 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 PYCR1P32322 319 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 CLRN1P58418 232 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 SIRPAP78324 504 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 FOXF2Q12947 444 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 ETFDHQ16134 617 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 KLHL12Q53G59 568 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 C6orf141Q5SZD1 244 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 FAM205BPQ63HN1 556 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 NCCRP1Q6ZVX7 275 aaPredicted RBP11.86□□□□□ -0.51
CLK4-210ENST00000522136 OR6V1Q8N148 313 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 ZNF786Q8N393 782 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 NOXO1Q8NFA2 376 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 BPIFB6Q8NFQ5 453 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 ADAD1Q96M93 576 aaKnown RBP11.86□□□□□ -0.51
CLK4-210ENST00000522136 FOXN4Q96NZ1 517 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 NMNAT2Q9BZQ4 307 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 TP63Q9H3D4 680 aaPredicted RBP11.86□□□□□ -0.51
CLK4-210ENST00000522136 C12orf49Q9H741 205 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 VSX1Q9NZR4 365 aaPredicted RBP11.86□□□□□ -0.51
CLK4-210ENST00000522136 EMC3Q9P0I2 261 aa11.86□□□□□ -0.51
CLK4-210ENST00000522136 MBD3L4A6NDZ8 208 aaPredicted RBP11.85□□□□□ -0.51
CLK4-210ENST00000522136 MBD3L3A6NE82 208 aaPredicted RBP11.85□□□□□ -0.51
CLK4-210ENST00000522136 MBD3L5A6NJ08 208 aaPredicted RBP11.85□□□□□ -0.51
CLK4-210ENST00000522136 SLC16A7O60669 478 aa11.85□□□□□ -0.51
CLK4-210ENST00000522136 MRPL33O75394 65 aaKnown RBP11.85□□□□□ -0.51
CLK4-210ENST00000522136 CTLA4P16410 223 aa11.85□□□□□ -0.51
CLK4-210ENST00000522136 PAICSP22234 425 aaKnown RBP11.85□□□□□ -0.51
CLK4-210ENST00000522136 PTGER4P35408 488 aa11.85□□□□□ -0.51
CLK4-210ENST00000522136 POLEQ07864 2286 aa11.85□□□□□ -0.51
CLK4-210ENST00000522136 MRPL49Q13405 166 aaKnown RBP11.85□□□□□ -0.51
CLK4-210ENST00000522136 APOFQ13790 326 aa11.85□□□□□ -0.51
CLK4-210ENST00000522136 SF3B4Q15427 424 aaKnown RBP eCLIP11.85□□□□□ -0.511e-6■■■■□ 22.8
CLK4-210ENST00000522136 OCLNQ16625 522 aa11.85□□□□□ -0.51
CLK4-210ENST00000522136 TMEM201Q5SNT2 666 aa11.85□□□□□ -0.51
CLK4-210ENST00000522136 UGT2A3Q6UWM9 527 aa11.85□□□□□ -0.51
CLK4-210ENST00000522136 B3GNT6Q6ZMB0 384 aa11.85□□□□□ -0.51
CLK4-210ENST00000522136 OR6N1Q8NGY5 312 aa11.85□□□□□ -0.51
CLK4-210ENST00000522136 MBD3L2Q8NHZ7 208 aaPredicted RBP11.85□□□□□ -0.51
CLK4-210ENST00000522136 GMPPAQ96IJ6 420 aaPredicted RBP11.85□□□□□ -0.51
CLK4-210ENST00000522136 TTYH2Q9BSA4 534 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms