RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 FAM220AQ7Z4H9 259 aa16.61■□□□□ 0.25
TRAPPC9-210ENST00000521667 TMEM156Q8N614 296 aa16.61■□□□□ 0.25
TRAPPC9-210ENST00000521667 TEX19Q8NA77 164 aa16.61■□□□□ 0.25
TRAPPC9-210ENST00000521667 OR13C5Q8NGS8 318 aa16.61■□□□□ 0.25
TRAPPC9-210ENST00000521667 ANGPTL4Q9BY76 406 aa16.61■□□□□ 0.25
TRAPPC9-210ENST00000521667 ETAA1Q9NY74 926 aa16.61■□□□□ 0.25
TRAPPC9-210ENST00000521667 COMMD3Q9UBI1 195 aa16.61■□□□□ 0.25
TRAPPC9-210ENST00000521667 TMEM14AQ9Y6G1 99 aa16.61■□□□□ 0.25
TRAPPC9-210ENST00000521667 A6NIZ1 184 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 MASP2O00187 686 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 SLC16A7O60669 478 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 ICAM2P13598 275 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 TCEA1P23193 301 aaKnown RBP16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 EIF1P41567 113 aaKnown RBP16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 CENPAP49450 140 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 DAP3P51398 398 aaKnown RBP16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 BLVRAP53004 296 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 RAP1BP61224 184 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 RAP1AP62834 184 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 PPP3R1P63098 170 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 MYBPHQ13203 477 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 DNASE1L3Q13609 305 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 SSPNQ14714 243 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 SLC22A16Q86VW1 577 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 TPRA1Q86W33 373 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 PLCZ1Q86YW0 608 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 RPS4Y2Q8TD47 263 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 PAQR8Q8TEZ7 354 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 C5orf34Q96MH7 638 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 POLE4Q9NR33 117 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 MRM2Q9UI43 246 aaKnown RBP16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 B3GALT5Q9Y2C3 310 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 IGLV1-36A0A0B4J1U3 117 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 NPIPB13A6NJU9 1138 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 NPIPB4C9JG80 1138 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 NPIPA5E9PKD4 350 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 GPRIN2O60269 458 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 FZD7O75084 574 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 GPANK1O95872 356 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 MT-CO3P00414 261 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 OR8G3PP0DMU2 310 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 CCL3P10147 92 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 ALOX5APP20292 161 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 ADH6P28332 368 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 ZMAT1Q5H9K5 638 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 MZT2AQ6P582 158 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 DPY19L4Q7Z388 723 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 NR2C2APQ86WQ0 139 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 OR5M1Q8NGP8 315 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 HAVCR2Q8TDQ0 301 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 ASB10Q8WXI3 467 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 DIRAS2Q96HU8 199 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 SH2D2AQ9NP31 389 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 NPIPA1Q9UND3 350 aa16.6■□□□□ 0.25
TRAPPC9-210ENST00000521667 CCDC187A0A096LP49 1063 aa16.59■□□□□ 0.25
TRAPPC9-210ENST00000521667 PHYHO14832 338 aa16.59■□□□□ 0.25
TRAPPC9-210ENST00000521667 HPP00738 406 aa16.59■□□□□ 0.25
TRAPPC9-210ENST00000521667 HLA-DQA2P01906 255 aa16.59■□□□□ 0.25
TRAPPC9-210ENST00000521667 KRT8P05787 483 aa16.59■□□□□ 0.25
TRAPPC9-210ENST00000521667 IFNGR1P15260 489 aa16.59■□□□□ 0.25
TRAPPC9-210ENST00000521667 CTLA4P16410 223 aa16.59■□□□□ 0.25
TRAPPC9-210ENST00000521667 RPS11P62280 158 aaKnown RBP eCLIP16.59■□□□□ 0.25
TRAPPC9-210ENST00000521667 RPS15P62841 145 aaKnown RBP16.59■□□□□ 0.25
TRAPPC9-210ENST00000521667 MRPL28Q13084 256 aaKnown RBP16.59■□□□□ 0.25
TRAPPC9-210ENST00000521667 ZNF79Q15937 498 aa16.59■□□□□ 0.25
TRAPPC9-210ENST00000521667 SLC22A10Q63ZE4 541 aa16.59■□□□□ 0.25
TRAPPC9-210ENST00000521667 RNF166Q96A37 237 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC9-210ENST00000521667 ZBTB8AQ96BR9 441 aa16.59■□□□□ 0.25
TRAPPC9-210ENST00000521667 PDCD1LG2Q9BQ51 273 aa16.59■□□□□ 0.25
TRAPPC9-210ENST00000521667 FANCFQ9NPI8 374 aa16.59■□□□□ 0.25
TRAPPC9-210ENST00000521667 RYDENQ9NUL5 291 aaKnown RBP16.59■□□□□ 0.25
TRAPPC9-210ENST00000521667 HPF1Q9NWY4 346 aa16.59■□□□□ 0.25
TRAPPC9-210ENST00000521667 A0A087WZY1 265 aa16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 A0A1W2PNU3 283 aaPredicted RBP16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 GATBO75879 557 aaKnown RBP16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 CRABP1P29762 137 aa16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 FOXK1P85037 733 aa16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 HSF1Q00613 529 aa16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 POU3F1Q03052 451 aaPredicted RBP16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 EGR3Q06889 387 aa16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 SELENBP1Q13228 472 aa16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 EIF3IQ13347 325 aaKnown RBP16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 HBMQ6B0K9 141 aa16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 FAM131AQ6UXB0 335 aa16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 SLC35D2Q76EJ3 337 aa16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 YIPF7Q8N8F6 280 aa16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 POC5Q8NA72 575 aa16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 OTOSQ8NHW6 89 aa16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 SLC25A43Q8WUT9 341 aaPredicted RBP16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 ACOT12Q8WYK0 555 aa16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 NTNG2Q96CW9 530 aa16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 LRFN3Q9BTN0 628 aa16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 SRRQ9GZT4 340 aa16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 TSPAN10Q9H1Z9 355 aaPredicted RBP16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 TMEM185BQ9H7F4 350 aa16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 FOXJ2Q9P0K8 574 aa16.58■□□□□ 0.25
TRAPPC9-210ENST00000521667 A0A1W2PNV4 684 aa16.58■□□□□ 0.24
TRAPPC9-210ENST00000521667 FABP12A6NFH5 140 aa16.58■□□□□ 0.24
TRAPPC9-210ENST00000521667 UPK3AO75631 287 aa16.58■□□□□ 0.24
TRAPPC9-210ENST00000521667 ARL6IP5O75915 188 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms