RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ZNF627Q7L945 461 aa18■□□□□ 0.47
TRIM35-203ENST00000521253 DEPDC4Q8N2C3 294 aa18■□□□□ 0.47
TRIM35-203ENST00000521253 WFDC11Q8NEX6 87 aa18■□□□□ 0.47
TRIM35-203ENST00000521253 SLC7A13Q8TCU3 470 aa18■□□□□ 0.47
TRIM35-203ENST00000521253 BCAS4Q8TDM0 211 aa18■□□□□ 0.47
TRIM35-203ENST00000521253 ASB10Q8WXI3 467 aa18■□□□□ 0.47
TRIM35-203ENST00000521253 PERPQ96FX8 193 aa18■□□□□ 0.47
TRIM35-203ENST00000521253 SLC38A2Q96QD8 506 aa18■□□□□ 0.47
TRIM35-203ENST00000521253 CXorf56Q9H5V9 222 aa18■□□□□ 0.47
TRIM35-203ENST00000521253 CRNNQ9UBG3 495 aaPredicted RBP18■□□□□ 0.47
TRIM35-203ENST00000521253 USF3Q68DE3 2245 aa17.99■□□□□ 0.47
TRIM35-203ENST00000521253 PLCE1Q9P212 2302 aa17.99■□□□□ 0.47
TRIM35-203ENST00000521253 EFCAB9A8MZ26 197 aa17.99■□□□□ 0.47
TRIM35-203ENST00000521253 MCIDASD6RGH6 385 aa17.99■□□□□ 0.47
TRIM35-203ENST00000521253 ATP6V1G2-DDX39BF2Z307 99 aa17.99■□□□□ 0.47
TRIM35-203ENST00000521253 TMCC2O75069 709 aa17.99■□□□□ 0.47
TRIM35-203ENST00000521253 IGHG1P01857 330 aa17.99■□□□□ 0.47
TRIM35-203ENST00000521253 B4GALT1P15291 398 aa17.99■□□□□ 0.47
TRIM35-203ENST00000521253 PTH2RP49190 550 aa17.99■□□□□ 0.47
TRIM35-203ENST00000521253 DAP3P51398 398 aaKnown RBP17.99■□□□□ 0.47
TRIM35-203ENST00000521253 ALG10Q5BKT4 473 aa17.99■□□□□ 0.47
TRIM35-203ENST00000521253 PODNL1Q6PEZ8 512 aa17.99■□□□□ 0.47
TRIM35-203ENST00000521253 LRFN4Q6PJG9 635 aa17.99■□□□□ 0.47
TRIM35-203ENST00000521253 ZNF813Q6ZN06 617 aa17.99■□□□□ 0.47
TRIM35-203ENST00000521253 OR51A7Q8NH64 312 aa17.99■□□□□ 0.47
TRIM35-203ENST00000521253 FOXB1Q99853 325 aa17.99■□□□□ 0.47
TRIM35-203ENST00000521253 GSX2Q9BZM3 304 aa17.99■□□□□ 0.47
TRIM35-203ENST00000521253 ZNF701Q9NV72 531 aaPredicted RBP17.99■□□□□ 0.47
TRIM35-203ENST00000521253 FLNAP21333 2647 aaKnown RBP17.99■□□□□ 0.47
TRIM35-203ENST00000521253 TRAV27A0A087WT01 109 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 IGKV3-15P01624 115 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 IGLV1-44P01699 117 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 CECR9P0C854 216 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 PAX1P15863 534 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 CAPZA2P47755 286 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 CLRN1P58418 232 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 FHL1Q13642 323 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 FGD3Q5JSP0 725 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 Q5PR19 223 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 ARMC4Q5T2S8 1044 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 RRM2BQ7LG56 351 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 OAFQ86UD1 273 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 CCDC36Q8IYA8 594 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 FAM169BQ8N8A8 192 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 OR13C2Q8NGS9 318 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 TNFRSF13CQ96RJ3 184 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 ZNF347Q96SE7 839 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 SEPHS2Q99611 448 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 DHRS9Q9BPW9 319 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 TMUB1Q9BVT8 246 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 MRPL13Q9BYD1 178 aaKnown RBP17.98■□□□□ 0.47
TRIM35-203ENST00000521253 SEC61A2Q9H9S3 476 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 MOV10Q9HCE1 1003 aaKnown RBP17.98■□□□□ 0.47
TRIM35-203ENST00000521253 FAIMQ9NVQ4 179 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 MOKQ9UQ07 419 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 ATP23Q9Y6H3 246 aa17.98■□□□□ 0.47
TRIM35-203ENST00000521253 MTORP42345 2549 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 TRBV4-1A0A0J9YWV2 114 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 NPIPB13A6NJU9 1138 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 NPIPB4C9JG80 1138 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 OVOL3O00110 214 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 CDC42EP2O14613 210 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 ARHGEF9O43307 516 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 TRMUO75648 421 aaKnown RBP17.97■□□□□ 0.47
TRIM35-203ENST00000521253 CD8AP01732 235 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 HLA-HP01893 362 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 CELA3BP08861 270 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 QDPRP09417 244 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 CBR1P16152 277 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 ITGA2P17301 1181 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 ATP6V1B2P21281 511 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 GPR4P46093 362 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 SLC9A3P48764 834 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 HIST3H3Q16695 136 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 C3orf36Q3SXR2 165 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 SHEQ5VZ18 495 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 CYP2R1Q6VVX0 501 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 TMPRSS11FQ6ZWK6 438 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 HDDC2Q7Z4H3 204 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 DTX2Q86UW9 622 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 MDP1Q86V88 176 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 CDK20Q8IZL9 346 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 ARHGAP24Q8N264 748 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 LRRC75AQ8NAA5 344 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 SYT14Q8NB59 555 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 NOXO1Q8NFA2 376 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 OR52J3Q8NH60 311 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 DHRS1Q96LJ7 313 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 TRAF4Q9BUZ4 470 aaPredicted RBP17.97■□□□□ 0.47
TRIM35-203ENST00000521253 TXNIPQ9H3M7 391 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 ACANP16112 2415 aa17.97■□□□□ 0.47
TRIM35-203ENST00000521253 CENPBD1B2RD01 187 aa17.96■□□□□ 0.47
TRIM35-203ENST00000521253 DHHO43323 396 aa17.96■□□□□ 0.47
TRIM35-203ENST00000521253 ACADSP16219 412 aa17.96■□□□□ 0.47
TRIM35-203ENST00000521253 TTKP33981 857 aa17.96■□□□□ 0.47
TRIM35-203ENST00000521253 IDH3GP51553 393 aaPredicted RBP17.96■□□□□ 0.47
TRIM35-203ENST00000521253 MYBPC1Q00872 1141 aa17.96■□□□□ 0.47
TRIM35-203ENST00000521253 NAAAQ02083 359 aa17.96■□□□□ 0.47
TRIM35-203ENST00000521253 TOP3AQ13472 1001 aaPredicted RBP17.96■□□□□ 0.47
TRIM35-203ENST00000521253 SEC23BQ15437 767 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms