RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 PHF21AQ96BD5 680 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 ZNF524Q96C55 264 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 RHBDF1Q96CC6 855 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 DTNBP1Q96EV8 351 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 FAHD2AQ96GK7 314 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 C5orf30Q96GV9 206 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 RBM18Q96H35 190 aaKnown RBP3.21□□□□□ -1.9
VPS13B-208ENST00000521037 ZNF570Q96NI8 536 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 ERGIC2Q96RQ1 377 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 TBX15Q96SF7 602 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 VAT1Q99536 393 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 DOK1Q99704 481 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 B9D2Q9BPU9 175 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 MAPKAP1Q9BPZ7 522 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 CAPS2Q9BXY5 557 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 NXF5Q9H1B4 397 aaKnown RBP3.21□□□□□ -1.9
VPS13B-208ENST00000521037 FN3KQ9H479 309 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 RNPEPL1Q9HAU8 725 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 MOV10Q9HCE1 1003 aaKnown RBP3.21□□□□□ -1.9
VPS13B-208ENST00000521037 MRPL47Q9HD33 250 aaKnown RBP3.21□□□□□ -1.9
VPS13B-208ENST00000521037 MYOZ1Q9NP98 299 aaPredicted RBP3.21□□□□□ -1.9
VPS13B-208ENST00000521037 POLE3Q9NRF9 147 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 TREX1Q9NSU2 369 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 DCAF16Q9NXF7 216 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 TREM2Q9NZC2 230 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 KLHL8Q9P2G9 620 aaPredicted RBP3.21□□□□□ -1.9
VPS13B-208ENST00000521037 ICAM5Q9UMF0 924 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 AURKCQ9UQB9 309 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 PDE10AQ9Y233 779 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 RAP2CQ9Y3L5 183 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 HYOU1Q9Y4L1 999 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 TEX264Q9Y6I9 313 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 TRBV2A0A0J9YWF9 115 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 C13orf42A0A1B0GVH6 325 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 A0A1W2PPQ1 181 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 CLPSL1A2RUU4 121 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 GOLGA6L10A6NI86 522 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 OR5H1A6NKK0 313 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 ATP6V1G2-DDX39BF2Z307 99 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 PDLIM1O00151 329 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 HSPB6O14558 160 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 TIMM23O14925 209 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 ST8SIA3O43173 380 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 EFNA2O43921 213 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 SELENOFO60613 162 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 LYZL6O75951 148 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 RGS11O94810 467 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 IFNA16P05015 189 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 ABHD2P08910 425 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 ENO3P13929 434 aaPredicted RBP3.2□□□□□ -1.9
VPS13B-208ENST00000521037 RPS2P15880 293 aaKnown RBP3.2□□□□□ -1.9
VPS13B-208ENST00000521037 FERP16591 822 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 GPX3P22352 226 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 COL8A2P25067 703 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 NMBRP28336 390 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 SHC1P29353 583 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 WNT5AP41221 380 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 KCNJ1P48048 391 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 NR2C2P49116 596 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 HERVK_113P63132 956 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 ERVK-8P63133 956 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 DYNLT1P63172 113 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 IFFO1Q0D2I5 559 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 GAGE2BQ13066 116 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 SNTA1Q13424 505 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 TSTA3Q13630 321 aaPredicted RBP3.2□□□□□ -1.9
VPS13B-208ENST00000521037 GAMTQ14353 236 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 GANABQ14697 944 aaKnown RBP3.2□□□□□ -1.9
VPS13B-208ENST00000521037 EFNB3Q15768 340 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 SGCBQ16585 318 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 PPP1R3AQ16821 1122 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 GAGE2EQ4V326 116 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 FASTKD1Q53R41 847 aaKnown RBP3.2□□□□□ -1.9
VPS13B-208ENST00000521037 HSP90AA5PQ58FG0 334 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 ENTPD8Q5MY95 495 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 TIMM23BQ5SRD1 257 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 OR5M10Q6IEU7 315 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 PRR27Q6MZM9 219 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 GAGE2AQ6NT46 116 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 TTC23LQ6PF05 361 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 AGTRAPQ6RW13 159 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 C9orf139Q6ZV77 190 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 BHLHA15Q7RTS1 189 aaPredicted RBP3.2□□□□□ -1.9
VPS13B-208ENST00000521037 P4HA3Q7Z4N8 544 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 PATL1Q86TB9 770 aaKnown RBP3.2□□□□□ -1.9
VPS13B-208ENST00000521037 UBQLNLQ8IYU4 475 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 SPATA6LQ8N4H0 392 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 OTUD6BQ8N6M0 293 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 PRELID2Q8N945 189 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 LRRC57Q8N9N7 239 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 UXS1Q8NBZ7 420 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 NOA1Q8NC60 698 aaKnown RBP3.2□□□□□ -1.9
VPS13B-208ENST00000521037 OR2M3Q8NG83 312 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 B4GALNT2Q8NHY0 566 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 TMEM163Q8TC26 289 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 LRRC8CQ8TDW0 803 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 ST7LQ8TDW4 575 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 RNF128Q8TEB7 428 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 ABHD3Q8WU67 409 aa3.2□□□□□ -1.9
VPS13B-208ENST00000521037 YIPF5Q969M3 257 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms