RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 IL20RBQ6UXL0 311 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 NLRC3Q7RTR2 1065 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 THAP4Q8WY91 577 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 PTP4A1Q93096 173 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 BRD7Q9NPI1 651 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 PNO1Q9NRX1 252 aaKnown RBP16.65■□□□□ 0.26
SDC2-202ENST00000518385 TAS2R5Q9NYW4 299 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 ZNF224Q9NZL3 707 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 DHCR7Q9UBM7 475 aaKnown RBP16.65■□□□□ 0.26
SDC2-202ENST00000518385 DTX4Q9Y2E6 619 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 SPTBP11277 2137 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 NUP210LQ5VU65 1888 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 DMDP11532 3685 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 FRG2CA6NGY1 282 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 HMSDA8MTL9 139 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 B3GALNT1O75752 331 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 IL33O95760 270 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 ATF1P18846 271 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 SRP9P49458 86 aaKnown RBP16.64■□□□□ 0.25
SDC2-202ENST00000518385 PLAURQ03405 335 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 POU4F3Q15319 338 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 SLC25A35Q3KQZ1 300 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 KLHL26Q53HC5 615 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 NHLRC3Q5JS37 347 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 OVCH2Q7RTZ1 564 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 MEX3DQ86XN8 651 aaKnown RBP16.64■□□□□ 0.25
SDC2-202ENST00000518385 FTMTQ8N4E7 242 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 LSM14AQ8ND56 463 aaKnown RBP16.64■□□□□ 0.25
SDC2-202ENST00000518385 ZNF671Q8TAW3 534 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 RPS4Y2Q8TD47 263 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 NACC2Q96BF6 587 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 BPIFA2Q96DR5 249 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 CCDC74BQ96LY2 380 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 ZNF426Q9BUY5 554 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 DPH1Q9BZG8 443 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 TMEM9BQ9NQ34 198 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 UBQLN4Q9NRR5 601 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 RXFP3Q9NSD7 469 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 A0A1B0GWA3 101 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 FAM183AA6NL82 134 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 OR6C76A6NM76 312 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 OR2A4O95047 310 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 MPC2O95563 127 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 FAUP35544 74 aaKnown RBP16.64■□□□□ 0.25
SDC2-202ENST00000518385 GDI2P50395 445 aaKnown RBP16.64■□□□□ 0.25
SDC2-202ENST00000518385 FXYD6P3P58550 94 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 E2F1Q01094 437 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 COL9A2Q14055 689 aaPredicted RBP16.64■□□□□ 0.25
SDC2-202ENST00000518385 LINC00114Q6XXX2 140 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 GLDNQ6ZMI3 551 aaPredicted RBP16.64■□□□□ 0.25
SDC2-202ENST00000518385 C3P1Q6ZMU1 363 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 KCTD20Q7Z5Y7 419 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 ZNF614Q8N883 585 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 THRSPQ92748 146 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 ATOH1Q92858 354 aaPredicted RBP16.64■□□□□ 0.25
SDC2-202ENST00000518385 DACT3Q96B18 629 aaPredicted RBP16.64■□□□□ 0.25
SDC2-202ENST00000518385 OR2A7Q96R45 310 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 CNN2Q99439 309 aaKnown RBP16.64■□□□□ 0.25
SDC2-202ENST00000518385 EDEM2Q9BV94 578 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 HRASLSQ9HDD0 168 aa16.64■□□□□ 0.25
SDC2-202ENST00000518385 EXOSC3Q9NQT5 275 aaKnown RBP16.64■□□□□ 0.25
SDC2-202ENST00000518385 OR2W5A6NFC9 320 aa16.63■□□□□ 0.25
SDC2-202ENST00000518385 AIPO00170 330 aa16.63■□□□□ 0.25
SDC2-202ENST00000518385 LRP3O75074 770 aa16.63■□□□□ 0.25
SDC2-202ENST00000518385 DDAH2O95865 285 aa16.63■□□□□ 0.25
SDC2-202ENST00000518385 CSTAP01040 98 aa16.63■□□□□ 0.25
SDC2-202ENST00000518385 MAKP20794 623 aa16.63■□□□□ 0.25
SDC2-202ENST00000518385 GPR143P51810 404 aa16.63■□□□□ 0.25
SDC2-202ENST00000518385 TSPAN5P62079 268 aa16.63■□□□□ 0.25
SDC2-202ENST00000518385 SIRPAP78324 504 aa16.63■□□□□ 0.25
SDC2-202ENST00000518385 IL10RAQ13651 578 aa16.63■□□□□ 0.25
SDC2-202ENST00000518385 CSRP2Q16527 193 aa16.63■□□□□ 0.25
SDC2-202ENST00000518385 FAAH2Q6GMR7 532 aa16.63■□□□□ 0.25
SDC2-202ENST00000518385 B3GLCTQ6Y288 498 aa16.63■□□□□ 0.25
SDC2-202ENST00000518385 ZSCAN1Q8NBB4 408 aa16.63■□□□□ 0.25
SDC2-202ENST00000518385 ZNF721Q8TF20 911 aa16.63■□□□□ 0.25
SDC2-202ENST00000518385 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.63■□□□□ 0.25
SDC2-202ENST00000518385 FCAMRQ8WWV6 532 aa16.63■□□□□ 0.25
SDC2-202ENST00000518385 CLIP3Q96DZ5 547 aa16.63■□□□□ 0.25
SDC2-202ENST00000518385 ZFP3Q96NJ6 502 aa16.63■□□□□ 0.25
SDC2-202ENST00000518385 RDH8Q9NYR8 311 aa16.63■□□□□ 0.25
SDC2-202ENST00000518385 ICAM5Q9UMF0 924 aa16.63■□□□□ 0.25
SDC2-202ENST00000518385 IGLV3-12A0A075B6K2 115 aa16.62■□□□□ 0.25
SDC2-202ENST00000518385 PLSCR5A0PG75 271 aa16.62■□□□□ 0.25
SDC2-202ENST00000518385 D6RAR5 112 aa16.62■□□□□ 0.25
SDC2-202ENST00000518385 E9PI62 339 aa16.62■□□□□ 0.25
SDC2-202ENST00000518385 ACOT7O00154 380 aa16.62■□□□□ 0.25
SDC2-202ENST00000518385 CDK2AP1O14519 115 aa16.62■□□□□ 0.25
SDC2-202ENST00000518385 TO15178 435 aa16.62■□□□□ 0.25
SDC2-202ENST00000518385 CREBL2O60519 120 aaPredicted RBP16.62■□□□□ 0.25
SDC2-202ENST00000518385 ONECUT2O95948 504 aa16.62■□□□□ 0.25
SDC2-202ENST00000518385 IGF2P01344 180 aa16.62■□□□□ 0.25
SDC2-202ENST00000518385 NAGAP17050 411 aa16.62■□□□□ 0.25
SDC2-202ENST00000518385 PYCR1P32322 319 aa16.62■□□□□ 0.25
SDC2-202ENST00000518385 ZP1P60852 638 aa16.62■□□□□ 0.25
SDC2-202ENST00000518385 ZFP36L1Q07352 338 aaKnown RBP16.62■□□□□ 0.25
SDC2-202ENST00000518385 TRA2AQ13595 282 aaKnown RBP eCLIP16.62■□□□□ 0.251e-13■■□□□ 14.1
SDC2-202ENST00000518385 NSDHLQ15738 373 aa16.62■□□□□ 0.25
SDC2-202ENST00000518385 SLC6A19Q695T7 634 aa16.62■□□□□ 0.25
SDC2-202ENST00000518385 WDR88Q6ZMY6 472 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms