RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 ZNF133P52736 654 aaPredicted RBP8.72□□□□□ -1.01
CLN8-202ENST00000517514 LCN6P62502 163 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 ESRRGP62508 458 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 EFNB1P98172 346 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 NPRL3Q12980 569 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 GINS1Q14691 196 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 PTGES3Q15185 160 aaKnown RBP8.72□□□□□ -1.01
CLN8-202ENST00000517514 PGGHGQ32M88 737 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 ZIK1Q3SY52 487 aaPredicted RBP8.72□□□□□ -1.01
CLN8-202ENST00000517514 CARD17Q5XLA6 110 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 C12orf73Q69YU5 71 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 RPL13AP3Q6NVV1 102 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 MRGPRGQ86SM5 289 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 GABRG1Q8N1C3 465 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 GALNT4Q8N4A0 578 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 NPEPL1Q8NDH3 523 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 EME1Q96AY2 570 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 SLC25A44Q96H78 314 aaPredicted RBP8.72□□□□□ -1.01
CLN8-202ENST00000517514 ERMAPQ96PL5 475 aaPredicted RBP8.72□□□□□ -1.01
CLN8-202ENST00000517514 IFT27Q9BW83 186 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 LINC00470Q9BZP3 86 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 GRIP2Q9C0E4 1043 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 SLCO5A1Q9H2Y9 848 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 TOR3AQ9H497 397 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 ZNF556Q9HAH1 456 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 TBC1D23Q9NUY8 699 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 KIF17Q9P2E2 1029 aa8.72□□□□□ -1.01
CLN8-202ENST00000517514 SLC22A23A1A5C7 686 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 NKX2-6A6NCS4 301 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 OR6C68A6NDL8 312 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 DCTN6O00399 190 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 MSTNO14793 375 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 ITGA5P08648 1049 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 AGAP20933 346 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 IGHV1-2P23083 117 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 POU1F1P28069 291 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 GRNP28799 593 aaKnown RBP8.71□□□□□ -1.02
CLN8-202ENST00000517514 CCKARP32238 428 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 GRK5P34947 590 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 DAP3P51398 398 aaKnown RBP8.71□□□□□ -1.02
CLN8-202ENST00000517514 MYBPC1Q00872 1141 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 FMODQ06828 376 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 KRR1Q13601 381 aaKnown RBP8.71□□□□□ -1.02
CLN8-202ENST00000517514 TAF11Q15544 211 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 FBXL19-AS1Q494R0 122 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 SLC35F1Q5T1Q4 408 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 SLX4IPQ5VYV7 408 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 FBXW9Q5XUX1 488 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 GPR139Q6DWJ6 353 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 SLC25A47Q6Q0C1 308 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 C22orf34Q6ZV56 151 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 LUZP2Q86TE4 346 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 PACRGLQ8N7B6 248 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 SYT14Q8NB59 555 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 OR4K13Q8NH42 304 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 ZNRF4Q8WWF5 429 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 ASB5Q8WWX0 329 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 UBE2FQ969M7 185 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 APH1AQ96BI3 265 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 LRR1Q96L50 414 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 ADAD1Q96M93 576 aaKnown RBP8.71□□□□□ -1.02
CLN8-202ENST00000517514 ZNF570Q96NI8 536 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 HCAR1Q9BXC0 346 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 NELFAQ9H3P2 528 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 PIGMQ9H3S5 423 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 GPR35Q9HC97 309 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 PARPBPQ9NWS1 579 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 GLTPQ9NZD2 209 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 VSX1Q9NZR4 365 aaPredicted RBP8.71□□□□□ -1.02
CLN8-202ENST00000517514 MALT1Q9UDY8 824 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 PROCRQ9UNN8 238 aa8.71□□□□□ -1.02
CLN8-202ENST00000517514 SPTBN1Q01082 2364 aaKnown RBP8.7□□□□□ -1.02
CLN8-202ENST00000517514 DCHS2Q6V1P9 2916 aa8.7□□□□□ -1.02
CLN8-202ENST00000517514 PRSS37A4D1T9 235 aa8.7□□□□□ -1.02
CLN8-202ENST00000517514 ZNF726A6NNF4 738 aa8.7□□□□□ -1.02
CLN8-202ENST00000517514 FAM90A27PA6NNH2 459 aa8.7□□□□□ -1.02
CLN8-202ENST00000517514 CENPBD1B2RD01 187 aa8.7□□□□□ -1.02
CLN8-202ENST00000517514 H3BN98 237 aa8.7□□□□□ -1.02
CLN8-202ENST00000517514 RPL36A-HNRNPH2H7BZ11 118 aa8.7□□□□□ -1.02
CLN8-202ENST00000517514 M0R3G1 203 aa8.7□□□□□ -1.02
CLN8-202ENST00000517514 DVL2O14641 736 aa8.7□□□□□ -1.02
CLN8-202ENST00000517514 SURF4O15260 269 aa8.7□□□□□ -1.02
CLN8-202ENST00000517514 ARHGEF9O43307 516 aa8.7□□□□□ -1.02
CLN8-202ENST00000517514 IDH3BO43837 385 aa8.7□□□□□ -1.02
CLN8-202ENST00000517514 SMNDC1O75940 238 aaKnown RBP eCLIP8.7□□□□□ -1.02
CLN8-202ENST00000517514 SCG5P05408 212 aa8.7□□□□□ -1.02
CLN8-202ENST00000517514 COX5AP20674 150 aa8.7□□□□□ -1.02
CLN8-202ENST00000517514 NOS3P29474 1203 aa8.7□□□□□ -1.02
CLN8-202ENST00000517514 PTDSS1P48651 473 aaKnown RBP8.7□□□□□ -1.02
CLN8-202ENST00000517514 RPS6KA3P51812 740 aa8.7□□□□□ -1.02
CLN8-202ENST00000517514 SMSP52788 366 aa8.7□□□□□ -1.02
CLN8-202ENST00000517514 ADARB1P78563 741 aaKnown RBP8.7□□□□□ -1.02
CLN8-202ENST00000517514 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.7□□□□□ -1.02
CLN8-202ENST00000517514 TSC22D1Q15714 1073 aa8.7□□□□□ -1.02
CLN8-202ENST00000517514 ETFDHQ16134 617 aa8.7□□□□□ -1.02
CLN8-202ENST00000517514 SLC27A4Q6P1M0 643 aa8.7□□□□□ -1.02
CLN8-202ENST00000517514 MTFR2Q6P444 385 aa8.7□□□□□ -1.02
CLN8-202ENST00000517514 STAC2Q6ZMT1 411 aa8.7□□□□□ -1.02
CLN8-202ENST00000517514 Q6ZT83 130 aa8.7□□□□□ -1.02
CLN8-202ENST00000517514 ZNF100Q8IYN0 542 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms