RNA–Protein interactions for RNA: ENST00000517393.1

POLB-202, Transcript of DNA polymerase beta, humanhuman

TSL 3

Gene POLB, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-202ENST00000517393 CCDC50Q8IVM0 306 aa0.6□□□□□ -2.31
POLB-202ENST00000517393 CCDC65Q8IXS2 484 aa0.6□□□□□ -2.31
POLB-202ENST00000517393 PRSS58Q8IYP2 241 aa0.6□□□□□ -2.31
POLB-202ENST00000517393 OR2L13Q8N349 312 aa0.6□□□□□ -2.31
POLB-202ENST00000517393 KDM8Q8N371 416 aa0.6□□□□□ -2.31
POLB-202ENST00000517393 TMEM105Q8N8V8 129 aa0.6□□□□□ -2.31
POLB-202ENST00000517393 CATSPER1Q8NEC5 780 aa0.6□□□□□ -2.31
POLB-202ENST00000517393 STXBP6Q8NFX7 210 aa0.6□□□□□ -2.31
POLB-202ENST00000517393 OR5M1Q8NGP8 315 aa0.6□□□□□ -2.31
POLB-202ENST00000517393 OR4S2Q8NH73 311 aa0.6□□□□□ -2.31
POLB-202ENST00000517393 C15orf40Q8WUR7 153 aa0.6□□□□□ -2.31
POLB-202ENST00000517393 SLC13A3Q8WWT9 602 aa0.6□□□□□ -2.31
POLB-202ENST00000517393 CABS1Q96KC9 395 aa0.6□□□□□ -2.31
POLB-202ENST00000517393 AMDHD1Q96NU7 426 aa0.6□□□□□ -2.31
POLB-202ENST00000517393 SH3GL3Q99963 347 aa0.6□□□□□ -2.31
POLB-202ENST00000517393 SHANK2-AS3Q9BTD1 123 aa0.6□□□□□ -2.31
POLB-202ENST00000517393 PARP11Q9NR21 331 aa0.6□□□□□ -2.31
POLB-202ENST00000517393 FBXO6Q9NRD1 293 aaPredicted RBP0.6□□□□□ -2.31
POLB-202ENST00000517393 THUMPD1Q9NXG2 353 aaKnown RBP0.6□□□□□ -2.31
POLB-202ENST00000517393 SHPKQ9UHJ6 478 aa0.6□□□□□ -2.31
POLB-202ENST00000517393 CHMP2BQ9UQN3 213 aa0.6□□□□□ -2.31
POLB-202ENST00000517393 COL5A3P25940 1745 aaPredicted RBP0.6□□□□□ -2.31
POLB-202ENST00000517393 SF3B1O75533 1304 aaKnown RBP eCLIP0.6□□□□□ -2.319e-7■■■■■ 57.4
POLB-202ENST00000517393 A0A0U1RQV1 116 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 A8MUI8 341 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 KERAO60938 352 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 OR4F21O95013 312 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 FABP3P05413 133 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 GNAO1P09471 354 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 HLA-DPA1P20036 260 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 TCN1P20061 433 aaPredicted RBP0.59□□□□□ -2.31
POLB-202ENST00000517393 PCMT1P22061 227 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 ADRA1AP35348 466 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 SUB1P53999 127 aaKnown RBP eCLIP0.59□□□□□ -2.31
POLB-202ENST00000517393 STARD6P59095 220 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 FUT5Q11128 374 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 SPP2Q13103 211 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 VGLL4Q14135 290 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 MESDQ14696 234 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 OXA1LQ15070 435 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 TP53I3Q53FA7 332 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 ARMC3Q5W041 872 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 LINC00173Q6ZV60 143 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 CATSPER4Q7RTX7 472 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 KIAA1328Q86T90 577 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 OR5D13Q8NGL4 314 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 KLF14Q8TD94 323 aaPredicted RBP0.59□□□□□ -2.31
POLB-202ENST00000517393 SDR42E1Q8WUS8 393 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 NEURL3Q96EH8 262 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 C1orf198Q9H425 327 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 NHEJ1Q9H9Q4 299 aaPredicted RBP0.59□□□□□ -2.31
POLB-202ENST00000517393 MCCC2Q9HCC0 563 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 PALMDQ9NP74 551 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 SIGLEC8Q9NYZ4 499 aa0.59□□□□□ -2.31
POLB-202ENST00000517393 SPAG9O60271 1321 aaKnown RBP0.59□□□□□ -2.32
POLB-202ENST00000517393 KMT2BQ9UMN6 2715 aaPredicted RBP0.58□□□□□ -2.32
POLB-202ENST00000517393 TRAV39A0A0B4J263 110 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 A0A0U1RQV5 110 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 AP2A1O95782 977 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 IGLV2-8P01709 118 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 OPN1MWP04001 364 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 ZNF735P0CB33 412 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 OPN1MW2P0DN77 364 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 OPN1MW3P0DN78 364 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 DTYMKP23919 212 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 AK4P27144 223 aaPredicted RBP0.58□□□□□ -2.32
POLB-202ENST00000517393 CASP14P31944 242 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 RORAP35398 523 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 SLC15A2Q16348 729 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 CNIH2Q6PI25 160 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 HDDC2Q7Z4H3 204 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 RABEPKQ7Z6M1 372 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 SLC35F2Q8IXU6 374 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 ACOT4Q8N9L9 421 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 OR52B4Q8NGK2 314 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 UFD1Q92890 307 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 ZNF681Q96N22 645 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 ATP6V0BQ99437 205 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 RIT2Q99578 217 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 SLC25A2Q9BXI2 301 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 SLC17A5Q9NRA2 495 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 FAM49BQ9NUQ9 324 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 UVRAGQ9P2Y5 699 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 MMP17Q9ULZ9 603 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 N6AMT1Q9Y5N5 214 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 SCN1AP35498 2009 aa0.58□□□□□ -2.32
POLB-202ENST00000517393 MUC5ACP98088 5654 aa0.57□□□□□ -2.32
POLB-202ENST00000517393 NCAPD2Q15021 1401 aa0.57□□□□□ -2.32
POLB-202ENST00000517393 A0A1B0GVI7 797 aa0.57□□□□□ -2.32
POLB-202ENST00000517393 TMEM120BA0PK00 339 aa0.57□□□□□ -2.32
POLB-202ENST00000517393 OR6C70A6NIJ9 312 aa0.57□□□□□ -2.32
POLB-202ENST00000517393 A8MXQ7 604 aa0.57□□□□□ -2.32
POLB-202ENST00000517393 POLR1CO15160 346 aaPredicted RBP0.57□□□□□ -2.32
POLB-202ENST00000517393 MGRN1O60291 552 aa0.57□□□□□ -2.32
POLB-202ENST00000517393 GCM2O75603 506 aaPredicted RBP0.57□□□□□ -2.32
POLB-202ENST00000517393 RAB3DO95716 219 aa0.57□□□□□ -2.32
POLB-202ENST00000517393 OXSR1O95747 527 aaPredicted RBP0.57□□□□□ -2.32
POLB-202ENST00000517393 PRB1P04280 392 aa0.57□□□□□ -2.32
POLB-202ENST00000517393 GCAP28676 217 aa0.57□□□□□ -2.32
POLB-202ENST00000517393 CDKN2BP42772 138 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms