RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 IFI30P13284 250 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 CBR1P16152 277 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 ITGA2P17301 1181 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 ARR3P36575 388 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 MXRA7P84157 204 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 SPOCK1Q08629 439 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 FOXD4Q12950 439 aaPredicted RBP11.14□□□□□ -0.63
CLCN3-210ENST00000515420 ETFDHQ16134 617 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 HIST3H3Q16695 136 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 NRN1LQ496H8 165 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 MBOAT2Q6ZWT7 520 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 PIWIL3Q7Z3Z3 882 aaKnown RBP11.14□□□□□ -0.63
CLCN3-210ENST00000515420 TSEN54Q7Z6J9 526 aaKnown RBP11.14□□□□□ -0.63
CLCN3-210ENST00000515420 WDFY1Q8IWB7 410 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 NRMQ8IXM6 262 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 CDK20Q8IZL9 346 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 DEFB107AQ8IZN7 70 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 RNF148Q8N7C7 305 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 WFDC11Q8NEX6 87 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 NANOS1Q8WY41 292 aaKnown RBP11.14□□□□□ -0.63
CLCN3-210ENST00000515420 GTPBP3Q969Y2 492 aaKnown RBP11.14□□□□□ -0.63
CLCN3-210ENST00000515420 TRMT61AQ96FX7 289 aaKnown RBP11.14□□□□□ -0.63
CLCN3-210ENST00000515420 C7orf34Q96L11 122 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 KCNS3Q9BQ31 491 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 C1QTNF6Q9BXI9 259 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 MRPL13Q9BYD1 178 aaKnown RBP11.14□□□□□ -0.63
CLCN3-210ENST00000515420 NMNAT1Q9HAN9 279 aaPredicted RBP11.14□□□□□ -0.63
CLCN3-210ENST00000515420 DLL4Q9NR61 685 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 NDUFAF4Q9P032 175 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 ADAM21Q9UKJ8 722 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 FBXL3Q9UKT7 428 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 POFUT2Q9Y2G5 429 aa11.14□□□□□ -0.63
CLCN3-210ENST00000515420 FAM32AQ9Y421 112 aaKnown RBP11.14□□□□□ -0.63
CLCN3-210ENST00000515420 A0A087WUU8 490 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 MCIDASD6RGH6 385 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 E7EQL1 145 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 ARPC2O15144 300 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 IGHMP01871 453 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 SEMG1P04279 462 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 F13BP05160 661 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 H1F0P07305 194 aaKnown RBP11.13□□□□□ -0.63
CLCN3-210ENST00000515420 TCN1P20061 433 aaPredicted RBP11.13□□□□□ -0.63
CLCN3-210ENST00000515420 CALB2P22676 271 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 TTKP33981 857 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 AQP2P41181 271 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 YAP1P46937 504 aaKnown RBP11.13□□□□□ -0.63
CLCN3-210ENST00000515420 ZNF133P52736 654 aaPredicted RBP11.13□□□□□ -0.63
CLCN3-210ENST00000515420 NAAAQ02083 359 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 MELKQ14680 651 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 ALG10Q5BKT4 473 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 FAM205BPQ63HN1 556 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 ZNF730Q6ZMV8 503 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 ZNF813Q6ZN06 617 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 TMPRSS11FQ6ZWK6 438 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 RRM2BQ7LG56 351 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 DPPA2Q7Z7J5 298 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 FBXL14Q8N1E6 418 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 NOXO1Q8NFA2 376 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 IL17RDQ8NFM7 739 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 FNDC8Q8TC99 324 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 ASB10Q8WXI3 467 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 PERPQ96FX8 193 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 PYURFQ96I23 114 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 NSL1Q96IY1 281 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 DHRS1Q96LJ7 313 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 NSMCE2Q96MF7 247 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 TXNIPQ9H3M7 391 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 MUC13Q9H3R2 512 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 SMURF2Q9HAU4 748 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 CBLN4Q9NTU7 201 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 B3GNT2Q9NY97 397 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 RHCGQ9UBD6 479 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 TMEM5Q9Y2B1 443 aa11.13□□□□□ -0.63
CLCN3-210ENST00000515420 ZNF469Q96JG9 3925 aaPredicted RBP11.12□□□□□ -0.63
CLCN3-210ENST00000515420 ACANP16112 2415 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 ATP6V1G2-DDX39BF2Z307 99 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 DHHO43323 396 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 PDE5AO76074 875 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 CD8AP01732 235 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 CECR9P0C854 216 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 SAGP10523 405 aaPredicted RBP11.12□□□□□ -0.63
CLCN3-210ENST00000515420 MAKP20794 623 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 APOBEC3AP31941 199 aaPredicted RBP11.12□□□□□ -0.63
CLCN3-210ENST00000515420 ATP5J2P56134 94 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 CLRN1P58418 232 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 SMIM11AP58511 58 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 VLDLRP98155 873 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 GSG1Q2KHT4 349 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 MTX3Q5HYI7 312 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 ARMC4Q5T2S8 1044 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 C11orf71Q6IPW1 123 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 LRFN4Q6PJG9 635 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 B3GLCTQ6Y288 498 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 YTHDF3Q7Z739 585 aaKnown RBP11.12□□□□□ -0.63
CLCN3-210ENST00000515420 OAFQ86UD1 273 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 MUC15Q8N387 334 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 FAM86B1Q8N7N1 296 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 RBM15BQ8NDT2 890 aaKnown RBP11.12□□□□□ -0.63
CLCN3-210ENST00000515420 NUP37Q8NFH4 326 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 OR4F15Q8NGB8 312 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms