RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 TMEM231Q9H6L2 316 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 OR14J1Q9UGF5 321 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 ADAM29Q9UKF5 820 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 PLCH1Q4KWH8 1693 aa12.29□□□□□ -0.44
TCOF1-214ENST00000515035 A0A0A6YYJ9 748 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 A0A0J9YY10 115 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 UMAD1C9J7I0 102 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 H0Y8G0 127 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 SBK2P0C263 348 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 SLC7A9P82251 487 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 ZNF610Q8N9Z0 462 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 SUMF1Q8NBK3 374 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 RELL2Q8NC24 303 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-214ENST00000515035 OR2G3Q8NGZ4 309 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 OR51B6Q9H340 312 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 DUSP21Q9H596 190 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 LMAN1LQ9HAT1 526 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 PLSCR3Q9NRY6 295 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 TAS2R5Q9NYW4 299 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 ZNF724A8MTY0 619 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 H7BYZ3 331 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 SYT5O00445 386 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 B4GALT3O60512 393 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 GJB3O75712 270 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 THBS1P07996 1170 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 PIPP12273 146 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-214ENST00000515035 GLYR1Q49A26 553 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-214ENST00000515035 TMEM88Q6PEY1 159 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 DTD2Q96FN9 168 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 MAP6Q96JE9 813 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 MBOAT4Q96T53 435 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 UBQLN3Q9H347 655 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 MUTYHQ9UIF7 546 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 TMEM235A6NFC5 223 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 TGFBR1P36897 503 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 PRLHRP49683 370 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 EEF1A1P68104 462 aaKnown RBP12.28□□□□□ -0.44
TCOF1-214ENST00000515035 DGCR2P98153 550 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 SYT14P1Q58G82 188 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 CROCCQ5TZA2 2017 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 L3MBTL4Q8NA19 623 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 ZNF511Q8NB15 262 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 PLPP7Q8NBV4 271 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 NUDT22Q9BRQ3 303 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 TPSD1Q9BZJ3 242 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 CEBPBP17676 345 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 MMP11P24347 488 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 HOXC8P31273 242 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 TSFMP43897 325 aaKnown RBP12.28□□□□□ -0.44
TCOF1-214ENST00000515035 PRDX1Q06830 199 aaKnown RBP12.28□□□□□ -0.44
TCOF1-214ENST00000515035 YOD1Q5VVQ6 348 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-214ENST00000515035 ANKRD53Q8N9V6 530 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 OR8U1Q8NH10 309 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 TMEM255BQ8WV15 326 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 ULBP2Q9BZM5 246 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 SLC6A17Q9H1V8 727 aa12.28□□□□□ -0.44
TCOF1-214ENST00000515035 NDRG4Q9ULP0 352 aaKnown RBP12.28□□□□□ -0.44
TCOF1-214ENST00000515035 H2AFB1P0C5Y9 115 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 GCH1P30793 250 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 PTGER4P35408 488 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 SNCAP37840 140 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 OR1D4P47884 311 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 ACOT7LQ6ZUV0 252 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 KLHDC8BQ8IXV7 354 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 CPXM2Q8N436 756 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 NEURL3Q96EH8 262 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 PDCD1LG2Q9BQ51 273 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 TMEM38AQ9H6F2 299 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 EMC9Q9Y3B6 208 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 NWD2Q9ULI1 1742 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 MCRIP1C9JLW8 97 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 DOK2O60496 412 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 TEAD1P28347 426 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 F2RL1P55085 397 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 OR5M10Q6IEU7 315 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 VASH1Q7L8A9 365 aaPredicted RBP12.27□□□□□ -0.44
TCOF1-214ENST00000515035 CPEB2Q7Z5Q1 589 aaKnown RBP12.27□□□□□ -0.44
TCOF1-214ENST00000515035 LGI3Q8N145 548 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 LMNTD1Q8N9Z9 388 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 KLHDC9Q8NEP7 349 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 OR51A4Q8NGJ6 313 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 PLK3Q9H4B4 646 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 IFT22Q9H7X7 185 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 RAB22AQ9UL26 194 aa12.27□□□□□ -0.44
TCOF1-214ENST00000515035 C2orf72A6NCS6 295 aa12.27□□□□□ -0.45
TCOF1-214ENST00000515035 TMEM221A6NGB7 291 aa12.27□□□□□ -0.45
TCOF1-214ENST00000515035 HOXC11O43248 304 aaPredicted RBP12.27□□□□□ -0.45
TCOF1-214ENST00000515035 ZNF264O43296 627 aa12.27□□□□□ -0.45
TCOF1-214ENST00000515035 NME2P1O60361 137 aa12.27□□□□□ -0.45
TCOF1-214ENST00000515035 HNRNPA2B1P22626 353 aaKnown RBP12.27□□□□□ -0.45
TCOF1-214ENST00000515035 ZNF93P35789 620 aaPredicted RBP12.27□□□□□ -0.45
TCOF1-214ENST00000515035 MEP1BQ16820 701 aa12.27□□□□□ -0.45
TCOF1-214ENST00000515035 IL22RA1Q8N6P7 574 aa12.27□□□□□ -0.45
TCOF1-214ENST00000515035 CLEC1AQ8NC01 280 aa12.27□□□□□ -0.45
TCOF1-214ENST00000515035 UBTD2Q8WUN7 234 aa12.27□□□□□ -0.45
TCOF1-214ENST00000515035 APH1BQ8WW43 257 aa12.27□□□□□ -0.45
TCOF1-214ENST00000515035 C1QTNF3Q9BXJ4 246 aa12.27□□□□□ -0.45
TCOF1-214ENST00000515035 CSAG2Q9Y5P2 127 aa12.27□□□□□ -0.45
TCOF1-214ENST00000515035 FITM1A5D6W6 292 aa12.27□□□□□ -0.45
TCOF1-214ENST00000515035 P2RY10O00398 339 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms