RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 ZNF10P21506 573 aaPredicted RBP8.81□□□□□ -1
VCAN-210ENST00000513960 PRKAR1BP31321 381 aa8.81□□□□□ -1
VCAN-210ENST00000513960 HOXA1P49639 335 aaPredicted RBP8.81□□□□□ -1
VCAN-210ENST00000513960 UBXN2BQ14CS0 331 aa8.81□□□□□ -1
VCAN-210ENST00000513960 RPL22L1Q6P5R6 122 aaKnown RBP8.81□□□□□ -1
VCAN-210ENST00000513960 ZNF761Q86XN6 746 aaPredicted RBP8.81□□□□□ -1
VCAN-210ENST00000513960 OR10G6Q8NH81 332 aa8.81□□□□□ -1
VCAN-210ENST00000513960 TCEAL3Q969E4 200 aa8.81□□□□□ -1
VCAN-210ENST00000513960 MS4A4EQ96PG1 132 aa8.81□□□□□ -1
VCAN-210ENST00000513960 ARHGDIGQ99819 225 aa8.81□□□□□ -1
VCAN-210ENST00000513960 SLC25A32Q9H2D1 315 aa8.81□□□□□ -1
VCAN-210ENST00000513960 MTHFD2LQ9H903 347 aaPredicted RBP8.81□□□□□ -1
VCAN-210ENST00000513960 MEPEQ9NQ76 525 aaPredicted RBP8.81□□□□□ -1
VCAN-210ENST00000513960 NCDNQ9UBB6 729 aa8.81□□□□□ -1
VCAN-210ENST00000513960 NPTNQ9Y639 398 aa8.81□□□□□ -1
VCAN-210ENST00000513960 MUC22E2RYF6 1773 aaPredicted RBP8.81□□□□□ -1
VCAN-210ENST00000513960 A0A087WV48 116 aa8.81□□□□□ -1
VCAN-210ENST00000513960 TMEM82A0PJX8 343 aa8.81□□□□□ -1
VCAN-210ENST00000513960 TMEM72A0PK05 275 aa8.81□□□□□ -1
VCAN-210ENST00000513960 POM121BA6NF01 834 aa8.81□□□□□ -1
VCAN-210ENST00000513960 SNRPGP15A8MWD9 76 aa8.81□□□□□ -1
VCAN-210ENST00000513960 B3GALT2O43825 422 aa8.81□□□□□ -1
VCAN-210ENST00000513960 SLC25A12O75746 678 aa8.81□□□□□ -1
VCAN-210ENST00000513960 AKR7A3O95154 331 aa8.81□□□□□ -1
VCAN-210ENST00000513960 HPP00738 406 aa8.81□□□□□ -1
VCAN-210ENST00000513960 HLA-AP01891 365 aaKnown RBP8.81□□□□□ -1
VCAN-210ENST00000513960 THY1P04216 161 aa8.81□□□□□ -1
VCAN-210ENST00000513960 FABP1P07148 127 aa8.81□□□□□ -1
VCAN-210ENST00000513960 AKAIN1P0CW23 69 aa8.81□□□□□ -1
VCAN-210ENST00000513960 HOXB2P14652 356 aa8.81□□□□□ -1
VCAN-210ENST00000513960 GALP22466 123 aa8.81□□□□□ -1
VCAN-210ENST00000513960 AGTR1P30556 359 aa8.81□□□□□ -1
VCAN-210ENST00000513960 PRSS3P35030 304 aa8.81□□□□□ -1
VCAN-210ENST00000513960 RORAP35398 523 aa8.81□□□□□ -1
VCAN-210ENST00000513960 SNTB1Q13884 538 aaKnown RBP8.81□□□□□ -1
VCAN-210ENST00000513960 ARHGAP40Q5TG30 622 aa8.81□□□□□ -1
VCAN-210ENST00000513960 PARM1Q6UWI2 310 aa8.81□□□□□ -1
VCAN-210ENST00000513960 NAXDQ8IW45 347 aa8.81□□□□□ -1
VCAN-210ENST00000513960 LINC00469Q8N7U9 141 aa8.81□□□□□ -1
VCAN-210ENST00000513960 OR6N2Q8NGY6 317 aa8.81□□□□□ -1
VCAN-210ENST00000513960 SLC25A38Q96DW6 304 aa8.81□□□□□ -1
VCAN-210ENST00000513960 ZNF681Q96N22 645 aa8.81□□□□□ -1
VCAN-210ENST00000513960 CNTNAP3BQ96NU0 1288 aa8.81□□□□□ -1
VCAN-210ENST00000513960 TSSK2Q96PF2 358 aa8.81□□□□□ -1
VCAN-210ENST00000513960 UPB1Q9UBR1 384 aa8.81□□□□□ -1
VCAN-210ENST00000513960 TP53BP1Q12888 1972 aaPredicted RBP8.81□□□□□ -1
VCAN-210ENST00000513960 ANKRD20A5PA0PJZ0 165 aa8.81□□□□□ -1
VCAN-210ENST00000513960 GXYLT2A0PJZ3 443 aa8.81□□□□□ -1
VCAN-210ENST00000513960 H7C1C5 153 aa8.81□□□□□ -1
VCAN-210ENST00000513960 ZNF14P17017 642 aaPredicted RBP8.81□□□□□ -1
VCAN-210ENST00000513960 ZNF28P17035 718 aa8.81□□□□□ -1
VCAN-210ENST00000513960 AKR1C4P17516 323 aa8.81□□□□□ -1
VCAN-210ENST00000513960 NFYBP25208 207 aa8.81□□□□□ -1
VCAN-210ENST00000513960 TNFRSF4P43489 277 aa8.81□□□□□ -1
VCAN-210ENST00000513960 LCN6P62502 163 aa8.81□□□□□ -1
VCAN-210ENST00000513960 DUSP5Q16690 384 aa8.81□□□□□ -1
VCAN-210ENST00000513960 GLT8D1Q68CQ7 371 aa8.81□□□□□ -1
VCAN-210ENST00000513960 WDR88Q6ZMY6 472 aa8.81□□□□□ -1
VCAN-210ENST00000513960 OVCH1Q7RTY7 1134 aa8.81□□□□□ -1
VCAN-210ENST00000513960 JAZF1Q86VZ6 243 aa8.81□□□□□ -1
VCAN-210ENST00000513960 LDLRAD3Q86YD5 345 aa8.81□□□□□ -1
VCAN-210ENST00000513960 FAM219AQ8IW50 185 aa8.81□□□□□ -1
VCAN-210ENST00000513960 OR1M1Q8NGA1 313 aa8.81□□□□□ -1
VCAN-210ENST00000513960 OR5AK2Q8NH90 309 aa8.81□□□□□ -1
VCAN-210ENST00000513960 FGF11Q92914 225 aa8.81□□□□□ -1
VCAN-210ENST00000513960 PBX4Q9BYU1 374 aa8.81□□□□□ -1
VCAN-210ENST00000513960 ZCCHC4Q9H5U6 513 aa8.81□□□□□ -1
VCAN-210ENST00000513960 FBXO34Q9NWN3 711 aa8.81□□□□□ -1
VCAN-210ENST00000513960 WBP1LQ9NX94 342 aa8.81□□□□□ -1
VCAN-210ENST00000513960 GPN3Q9UHW5 284 aaPredicted RBP8.81□□□□□ -1
VCAN-210ENST00000513960 LHX6Q9UPM6 363 aa8.81□□□□□ -1
VCAN-210ENST00000513960 FAM96BQ9Y3D0 163 aa8.81□□□□□ -1
VCAN-210ENST00000513960 RNF215Q9Y6U7 377 aa8.81□□□□□ -1
VCAN-210ENST00000513960 SPACA6W5XKT8 324 aa8.81□□□□□ -1
VCAN-210ENST00000513960 DENND4AQ7Z401 1863 aa8.81□□□□□ -1
VCAN-210ENST00000513960 TRAV1-2A0A0B4J238 106 aa8.8□□□□□ -1
VCAN-210ENST00000513960 OR5H14A6NHG9 310 aa8.8□□□□□ -1
VCAN-210ENST00000513960 CRYBA1P05813 215 aa8.8□□□□□ -1
VCAN-210ENST00000513960 GABRA3P34903 492 aa8.8□□□□□ -1
VCAN-210ENST00000513960 ALG10BQ5I7T1 473 aa8.8□□□□□ -1
VCAN-210ENST00000513960 MFSD12Q6NUT3 480 aa8.8□□□□□ -1
VCAN-210ENST00000513960 ARHGAP11AQ6P4F7 1023 aa8.8□□□□□ -1
VCAN-210ENST00000513960 VN1R4Q7Z5H5 301 aa8.8□□□□□ -1
VCAN-210ENST00000513960 LNX2Q8N448 690 aa8.8□□□□□ -1
VCAN-210ENST00000513960 GATSQ8NAP1 163 aa8.8□□□□□ -1
VCAN-210ENST00000513960 OR7G2Q8NG99 324 aa8.8□□□□□ -1
VCAN-210ENST00000513960 TMED6Q8WW62 240 aa8.8□□□□□ -1
VCAN-210ENST00000513960 FGF14Q92915 247 aa8.8□□□□□ -1
VCAN-210ENST00000513960 TSACCQ96A04 125 aaPredicted RBP8.8□□□□□ -1
VCAN-210ENST00000513960 RASD2Q96D21 266 aa8.8□□□□□ -1
VCAN-210ENST00000513960 MYADMQ96S97 322 aa8.8□□□□□ -1
VCAN-210ENST00000513960 SLC6A7Q99884 636 aa8.8□□□□□ -1
VCAN-210ENST00000513960 ESRP2Q9H6T0 727 aaKnown RBP8.8□□□□□ -1
VCAN-210ENST00000513960 ZNF629Q9UEG4 869 aaPredicted RBP8.8□□□□□ -1
VCAN-210ENST00000513960 ZNF281Q9Y2X9 895 aa8.8□□□□□ -1
VCAN-210ENST00000513960 OR2M5A3KFT3 312 aa8.8□□□□□ -1
VCAN-210ENST00000513960 GSTZ1O43708 216 aaPredicted RBP8.8□□□□□ -1
VCAN-210ENST00000513960 CPN1P15169 458 aa8.8□□□□□ -1
VCAN-210ENST00000513960 CAPZA1P52907 286 aa8.8□□□□□ -1
VCAN-210ENST00000513960 EPHA4P54764 986 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms