RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 KRTAP2-2Q9BYT5 123 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 FRMD8P1Q9BZ68 369 aaPredicted RBP3.36□□□□□ -1.87
HTT-210ENST00000512909 ULBP3Q9BZM4 244 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 NMNAT2Q9BZQ4 307 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 PRORYQ9H606 182 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 FANCEQ9HB96 536 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 SLC40A1Q9NP59 571 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 AMBNQ9NP70 447 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 ASCL3Q9NQ33 180 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 MIOXQ9UGB7 285 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 SLC2A6Q9UGQ3 507 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 SPATA2Q9UM82 520 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 ASF1AQ9Y294 204 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 DHRS7Q9Y394 339 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 PCDH15Q96QU1 1955 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 FAM186AA6NE01 2351 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 GON4LQ3T8J9 2241 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 IGHV5-51A0A0C4DH38 117 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 LRIT2A6NDA9 550 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 ERI2A8K979 691 aaKnown RBP3.35□□□□□ -1.87
HTT-210ENST00000512909 IQCF5A8MTL0 148 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 E5RI56 91 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 NPIPA2E9PIF3 369 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 K7ENP7 123 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 AP3B1O00203 1094 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 GPRIN2O60269 458 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 OR1I1O60431 355 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 SPAG6O75602 509 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 SCRG1O75711 98 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 B3GALNT1O75752 331 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 RHBDL1O75783 438 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 TGFAP01135 160 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 GSTT2P0CG29 244 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 GSTT2BP0CG30 244 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 RRASP10301 218 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 PVRP15151 417 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 FOLR1P15328 257 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 CD82P27701 267 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 PRDX3P30048 256 aaKnown RBP3.35□□□□□ -1.87
HTT-210ENST00000512909 COILP38432 576 aaPredicted RBP3.35□□□□□ -1.87
HTT-210ENST00000512909 NSG1P42857 185 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 SLC6A8P48029 635 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 GSK3BP49841 420 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 RPS15P62841 145 aaKnown RBP3.35□□□□□ -1.87
HTT-210ENST00000512909 UBE2IP63279 158 aaKnown RBP3.35□□□□□ -1.87
HTT-210ENST00000512909 XIAPP98170 497 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 MSLNQ13421 630 aaPredicted RBP3.35□□□□□ -1.87
HTT-210ENST00000512909 CYLC2Q14093 348 aaPredicted RBP3.35□□□□□ -1.87
HTT-210ENST00000512909 SLC10A1Q14973 349 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 TMED2Q15363 201 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 CCDC137Q6PK04 289 aaKnown RBP3.35□□□□□ -1.87
HTT-210ENST00000512909 AFTPHQ6ULP2 937 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 C4orf22Q6V702 233 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 CERS6Q6ZMG9 384 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 C17orf82Q86X59 251 aaPredicted RBP3.35□□□□□ -1.87
HTT-210ENST00000512909 KRTAP7-1Q8IUC3 87 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 ZNF547Q8IVP9 402 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 MISPQ8IVT2 679 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 PIANPQ8IYJ0 282 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 CSNK1G2-AS1Q8NCQ2 148 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 OR5AR1Q8NGP9 310 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 RFESDQ8TAC1 157 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 AGAP11Q8TF27 550 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 UBE2Q2Q8WVN8 375 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 FOPNLQ96NB1 174 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 NRTNQ99748 197 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 NGBQ9NPG2 151 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 FBXO8Q9NRD0 319 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 C20orf96Q9NUD7 363 aaPredicted RBP3.35□□□□□ -1.87
HTT-210ENST00000512909 KLRF1Q9NZS2 232 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 CHMP2BQ9UQN3 213 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 RNF24Q9Y225 148 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 FARSAQ9Y285 508 aaKnown RBP3.35□□□□□ -1.87
HTT-210ENST00000512909 CACNA1HO95180 2353 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 RIF1Q5UIP0 2472 aaKnown RBP3.35□□□□□ -1.87
HTT-210ENST00000512909 SPAG17Q6Q759 2223 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 TNRC6BQ9UPQ9 1833 aaKnown RBP3.35□□□□□ -1.87
HTT-210ENST00000512909 OTOGLQ3ZCN5 2332 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 WDFY4Q6ZS81 3184 aa3.35□□□□□ -1.87
HTT-210ENST00000512909 A0A0A6YYD4 124 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 IGHV3-16A0A0C4DH30 117 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 MFSD2BA6NFX1 497 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 C2orf74A8MZ97 194 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 PGRMC1O00264 195 aaKnown RBP3.34□□□□□ -1.87
HTT-210ENST00000512909 BTN3A3O00478 584 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 LIN7AO14910 233 aaPredicted RBP3.34□□□□□ -1.87
HTT-210ENST00000512909 CRLF1O75462 422 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 SCGB2A1O75556 95 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 ANP32DO95626 131 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 ECDO95905 644 aaPredicted RBP3.34□□□□□ -1.87
HTT-210ENST00000512909 RPN2P04844 631 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 UQCRHP07919 91 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 THRAP10827 490 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 SFTPCP11686 197 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 NELFEP18615 380 aaKnown RBP3.34□□□□□ -1.87
HTT-210ENST00000512909 TNNI3P19429 210 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 CASQ1P31415 396 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 CCR7P32248 378 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 SHMT2P34897 504 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 SAA4P35542 130 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms