RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 ATXN7L3Q14CW9 347 aaPredicted RBP3.57□□□□□ -1.84
CHD1-209ENST00000512844 MAPRE2Q15555 327 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 CEP170Q5SW79 1584 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 MAGI3Q5TCQ9 1506 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 C9orf84Q5VXU9 1444 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 TWF2Q6IBS0 349 aaKnown RBP3.57□□□□□ -1.84
CHD1-209ENST00000512844 KCNIP4Q6PIL6 250 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 IGFL2Q6UWQ7 119 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 RAI1Q7Z5J4 1906 aaPredicted RBP3.57□□□□□ -1.84
CHD1-209ENST00000512844 LHFPL4Q7Z7J7 247 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 CCDC50Q8IVM0 306 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 CDKL3Q8IVW4 592 aaPredicted RBP3.57□□□□□ -1.84
CHD1-209ENST00000512844 SLC7A5P1Q8MH63 180 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 GABRG1Q8N1C3 465 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 DCAF4L2Q8NA75 395 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 GATSQ8NAP1 163 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 FAM83FQ8NEG4 500 aaPredicted RBP3.57□□□□□ -1.84
CHD1-209ENST00000512844 OR5AU1Q8NGC0 362 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 TNFRSF14Q92956 283 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 ZNF285Q96NJ3 590 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 PANX1Q96RD7 426 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 ERBINQ96RT1 1412 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 ACBD6Q9BR61 282 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 ANKRD60Q9BZ19 345 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 UCK1Q9HA47 277 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 ELOVL3Q9HB03 270 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 MRPS30Q9NP92 439 aaKnown RBP3.57□□□□□ -1.84
CHD1-209ENST00000512844 UFSP2Q9NUQ7 469 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 PSMC3IPQ9P2W1 217 aaPredicted RBP3.57□□□□□ -1.84
CHD1-209ENST00000512844 UXTQ9UBK9 157 aaPredicted RBP3.57□□□□□ -1.84
CHD1-209ENST00000512844 CTSFQ9UBX1 484 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 BTNL2Q9UIR0 455 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 FLVCR2Q9UPI3 526 aa3.57□□□□□ -1.84
CHD1-209ENST00000512844 CHD4Q14839 1912 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 EIF4G3O43432 1585 aaKnown RBP3.56□□□□□ -1.84
CHD1-209ENST00000512844 ARHGEF5Q12774 1597 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 URB2Q14146 1524 aaKnown RBP3.56□□□□□ -1.84
CHD1-209ENST00000512844 ABCC2Q92887 1545 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 IFT140Q96RY7 1462 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 IGHV1OR15-1A0A075B7D0 117 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 TRBV11-1A0A0K0K1C0 115 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 RAB19A4D1S5 217 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 CCDC182A6NF36 153 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 BCKDKO14874 412 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 ZSCAN12O43309 604 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 OR1F1O43749 312 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 HCN1O60741 890 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 AHSA1O95433 338 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 IGKV3-11P04433 115 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 CLTAP09496 248 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 UQCRC2P22695 453 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 PCK1P35558 622 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 CRATP43155 626 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 BTDP43251 543 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 CDH6P55285 790 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 TSPAN5P62079 268 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 LRRC63Q05C16 580 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 GNA13Q14344 377 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 TGFBIQ15582 683 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 CHI3L2Q15782 390 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 SYPL1Q16563 259 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 BEX5Q5H9J7 111 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 FAM120AOSQ5T036 256 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 LIPNQ5VXI9 398 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 WDR74Q6RFH5 385 aaPredicted RBP3.56□□□□□ -1.84
CHD1-209ENST00000512844 VRK2Q86Y07 508 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 PLCZ1Q86YW0 608 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 GTPBP8Q8N3Z3 284 aaPredicted RBP3.56□□□□□ -1.84
CHD1-209ENST00000512844 TMEM104Q8NE00 496 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 PIGCQ92535 297 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 MYLPFQ96A32 169 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 GLT1D1Q96MS3 346 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 ZNF578Q96N58 590 aaPredicted RBP3.56□□□□□ -1.84
CHD1-209ENST00000512844 COPS8Q99627 209 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 DUSP16Q9BY84 665 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 FRMD8P1Q9BZ68 369 aaPredicted RBP3.56□□□□□ -1.84
CHD1-209ENST00000512844 TM6SF2Q9BZW4 377 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 ROGDIQ9GZN7 287 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 FBXO44Q9H4M3 255 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 ELOVL6Q9H5J4 265 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 ZDHHC11Q9H8X9 412 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 MTCH1Q9NZJ7 389 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 STOX2Q9P2F5 926 aaPredicted RBP3.56□□□□□ -1.84
CHD1-209ENST00000512844 PRELID1Q9Y255 219 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 LRRIQ1Q96JM4 1722 aa3.56□□□□□ -1.84
CHD1-209ENST00000512844 PBRM1Q86U86 1689 aa3.55□□□□□ -1.84
CHD1-209ENST00000512844 KDM6BO15054 1643 aa3.55□□□□□ -1.84
CHD1-209ENST00000512844 PLXNC1O60486 1568 aa3.55□□□□□ -1.84
CHD1-209ENST00000512844 NUP153P49790 1475 aaKnown RBP3.55□□□□□ -1.84
CHD1-209ENST00000512844 PTPRGP23470 1445 aa3.55□□□□□ -1.84
CHD1-209ENST00000512844 PLEKHG1Q9ULL1 1385 aa3.55□□□□□ -1.84
CHD1-209ENST00000512844 GOLGA8QA0A0J9YX86 632 aa3.55□□□□□ -1.84
CHD1-209ENST00000512844 A0A0J9YXY3 114 aa3.55□□□□□ -1.84
CHD1-209ENST00000512844 LOC100131303A0A0U1RQF7 123 aa3.55□□□□□ -1.84
CHD1-209ENST00000512844 A0A1B0GVL5 298 aa3.55□□□□□ -1.84
CHD1-209ENST00000512844 OR2AG2A6NM03 316 aa3.55□□□□□ -1.84
CHD1-209ENST00000512844 SERPINE3A8MV23 424 aa3.55□□□□□ -1.84
CHD1-209ENST00000512844 SDHDO14521 159 aa3.55□□□□□ -1.84
CHD1-209ENST00000512844 ATP5HO75947 161 aa3.55□□□□□ -1.84
CHD1-209ENST00000512844 ZNF24P17028 368 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms