RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 FAM86B1Q8N7N1 296 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 FAM156AQ8NDB6 213 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 OR6X1Q8NH79 312 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 FGFBP3Q8TAT2 258 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 ZNF566Q969W8 418 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 MS4A3Q96HJ5 214 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 FOXB1Q99853 325 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 KATNB1Q9BVA0 655 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 POLR2J2Q9GZM3 115 aaKnown RBP11.54□□□□□ -0.56
RNF4-215ENST00000511843 POLR2J3Q9H1A7 115 aaKnown RBP11.54□□□□□ -0.56
RNF4-215ENST00000511843 ARL8BQ9NVJ2 186 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 GLTPQ9NZD2 209 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 ADA2Q9NZK5 511 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 ZNF224Q9NZL3 707 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 ABCD2Q9UBJ2 740 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 AP3M1Q9Y2T2 418 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 MED31Q9Y3C7 131 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 V9GYQ6 96 aa11.54□□□□□ -0.56
RNF4-215ENST00000511843 BCL10O95999 233 aa11.53□□□□□ -0.56
RNF4-215ENST00000511843 IGKV3-15P01624 115 aa11.53□□□□□ -0.56
RNF4-215ENST00000511843 PGA4P0DJD7 388 aa11.53□□□□□ -0.56
RNF4-215ENST00000511843 PGA3P0DJD8 388 aa11.53□□□□□ -0.56
RNF4-215ENST00000511843 THRBP10828 461 aa11.53□□□□□ -0.56
RNF4-215ENST00000511843 TCN1P20061 433 aaPredicted RBP11.53□□□□□ -0.56
RNF4-215ENST00000511843 MAKP20794 623 aa11.53□□□□□ -0.56
RNF4-215ENST00000511843 PRDX6P30041 224 aa11.53□□□□□ -0.56
RNF4-215ENST00000511843 APOBEC3AP31941 199 aaPredicted RBP11.53□□□□□ -0.56
RNF4-215ENST00000511843 MSX2P35548 267 aaPredicted RBP11.53□□□□□ -0.56
RNF4-215ENST00000511843 HGFACQ04756 655 aa11.53□□□□□ -0.56
RNF4-215ENST00000511843 ST3GAL3Q11203 375 aa11.53□□□□□ -0.56
RNF4-215ENST00000511843 TOP3AQ13472 1001 aaPredicted RBP11.53□□□□□ -0.56
RNF4-215ENST00000511843 MST1LQ2TV78 715 aa11.53□□□□□ -0.56
RNF4-215ENST00000511843 IFI44LQ53G44 452 aa11.53□□□□□ -0.56
RNF4-215ENST00000511843 C1QTNF12Q5T7M4 302 aa11.53□□□□□ -0.56
RNF4-215ENST00000511843 ZNF544Q6NX49 715 aa11.53□□□□□ -0.56
RNF4-215ENST00000511843 LRFN4Q6PJG9 635 aa11.53□□□□□ -0.56
RNF4-215ENST00000511843 TBPL2Q6SJ96 375 aa11.53□□□□□ -0.56
RNF4-215ENST00000511843 SYT14Q8NB59 555 aa11.53□□□□□ -0.56
RNF4-215ENST00000511843 GEMIN6Q8WXD5 167 aaKnown RBP11.53□□□□□ -0.56
RNF4-215ENST00000511843 ASB10Q8WXI3 467 aa11.53□□□□□ -0.56
RNF4-215ENST00000511843 SLC25A44Q96H78 314 aaPredicted RBP11.53□□□□□ -0.56
RNF4-215ENST00000511843 ADAD1Q96M93 576 aaKnown RBP11.53□□□□□ -0.56
RNF4-215ENST00000511843 ZNF347Q96SE7 839 aa11.53□□□□□ -0.56
RNF4-215ENST00000511843 FNDC11Q9BVV2 318 aa11.53□□□□□ -0.56
RNF4-215ENST00000511843 GRIP2Q9C0E4 1043 aa11.53□□□□□ -0.56
RNF4-215ENST00000511843 B3GNT2Q9NY97 397 aa11.53□□□□□ -0.56
RNF4-215ENST00000511843 IGHV2OR16-5A0A0B4J2B6 119 aa11.52□□□□□ -0.57
RNF4-215ENST00000511843 A0A1W2PRG6 482 aa11.52□□□□□ -0.57
RNF4-215ENST00000511843 MCIDASD6RGH6 385 aa11.52□□□□□ -0.57
RNF4-215ENST00000511843 PRSS23O95084 383 aa11.52□□□□□ -0.57
RNF4-215ENST00000511843 QDPRP09417 244 aa11.52□□□□□ -0.57
RNF4-215ENST00000511843 HOXB1P14653 301 aaPredicted RBP11.52□□□□□ -0.57
RNF4-215ENST00000511843 HOXB4P17483 251 aaPredicted RBP11.52□□□□□ -0.57
RNF4-215ENST00000511843 PTDSS1P48651 473 aaKnown RBP11.52□□□□□ -0.57
RNF4-215ENST00000511843 NUDT6P53370 316 aa11.52□□□□□ -0.57
RNF4-215ENST00000511843 CLRN1P58418 232 aa11.52□□□□□ -0.57
RNF4-215ENST00000511843 TRAM2Q15035 370 aa11.52□□□□□ -0.57
RNF4-215ENST00000511843 GSG1Q2KHT4 349 aa11.52□□□□□ -0.57
RNF4-215ENST00000511843 PIGWQ7Z7B1 504 aa11.52□□□□□ -0.57
RNF4-215ENST00000511843 SKA3Q8IX90 412 aa11.52□□□□□ -0.57
RNF4-215ENST00000511843 NRMQ8IXM6 262 aa11.52□□□□□ -0.57
RNF4-215ENST00000511843 OFCC1Q8IZS5 231 aa11.52□□□□□ -0.57
RNF4-215ENST00000511843 NOXO1Q8NFA2 376 aa11.52□□□□□ -0.57
RNF4-215ENST00000511843 OR13C2Q8NGS9 318 aa11.52□□□□□ -0.57
RNF4-215ENST00000511843 BPIFA2Q96DR5 249 aa11.52□□□□□ -0.57
RNF4-215ENST00000511843 SH3GL3Q99963 347 aa11.52□□□□□ -0.57
RNF4-215ENST00000511843 SPAG4Q9NPE6 437 aa11.52□□□□□ -0.57
RNF4-215ENST00000511843 INIPQ9NRY2 104 aa11.52□□□□□ -0.57
RNF4-215ENST00000511843 CA10Q9NS85 328 aa11.52□□□□□ -0.57
RNF4-215ENST00000511843 ARL2BPQ9Y2Y0 163 aa11.52□□□□□ -0.57
RNF4-215ENST00000511843 ZFHX3Q15911 3703 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 TRAV27A0A087WT01 109 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 A0A087WUU8 490 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 hCG_2039718K7EN88 272 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 DHHO43323 396 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 TRMUO75648 421 aaKnown RBP11.51□□□□□ -0.57
RNF4-215ENST00000511843 DIRAS1O95057 198 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 SLC2A10O95528 541 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 IGHG1P01857 330 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 HEXAP06865 529 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 OR4A8P0C604 315 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 ZNF14P17017 642 aaPredicted RBP11.51□□□□□ -0.57
RNF4-215ENST00000511843 THBS4P35443 961 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 ARR3P36575 388 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 GPR4P46093 362 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 GIPRP48546 466 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 FMODQ06828 376 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 RAB35Q15286 201 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 ADIPOQQ15848 244 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 SWI5Q1ZZU3 235 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 C3orf36Q3SXR2 165 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 GLYATQ6IB77 296 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 KRT80Q6KB66 452 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 ZNF730Q6ZMV8 503 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 DNM1P46Q6ZS02 220 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 ZNF627Q7L945 461 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 SLC22A24Q8N4F4 322 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 ZNF525Q8N782 197 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 CLDN22Q8N7P3 220 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 FAM169BQ8N8A8 192 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms