RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 RPS10P46783 165 aaKnown RBP2.07□□□□□ -2.08
CHD1-207ENST00000511628 RFX3P48380 749 aa2.07□□□□□ -2.08
CHD1-207ENST00000511628 TDGF1P3P51864 188 aa2.07□□□□□ -2.08
CHD1-207ENST00000511628 SUB1P53999 127 aaKnown RBP eCLIP2.07□□□□□ -2.08
CHD1-207ENST00000511628 CDH6P55285 790 aa2.07□□□□□ -2.08
CHD1-207ENST00000511628 ERVK-25P63136 954 aa2.07□□□□□ -2.08
CHD1-207ENST00000511628 GBE1Q04446 702 aa2.07□□□□□ -2.08
CHD1-207ENST00000511628 SGCAQ16586 387 aa2.07□□□□□ -2.08
CHD1-207ENST00000511628 XKR7Q5GH72 579 aa2.07□□□□□ -2.08
CHD1-207ENST00000511628 VAX1Q5SQQ9 334 aa2.07□□□□□ -2.08
CHD1-207ENST00000511628 ZNF621Q6ZSS3 439 aa2.07□□□□□ -2.08
CHD1-207ENST00000511628 LINC00173Q6ZV60 143 aa2.07□□□□□ -2.08
CHD1-207ENST00000511628 TTC5Q8N0Z6 440 aa2.07□□□□□ -2.08
CHD1-207ENST00000511628 GTPBP8Q8N3Z3 284 aaPredicted RBP2.07□□□□□ -2.08
CHD1-207ENST00000511628 FAM71E2Q8N5Q1 922 aa2.07□□□□□ -2.08
CHD1-207ENST00000511628 OR4F15Q8NGB8 312 aa2.07□□□□□ -2.08
CHD1-207ENST00000511628 RNF138Q8WVD3 245 aa2.07□□□□□ -2.08
CHD1-207ENST00000511628 SGK3Q96BR1 496 aa2.07□□□□□ -2.08
CHD1-207ENST00000511628 SH3GL1Q99961 368 aa2.07□□□□□ -2.08
CHD1-207ENST00000511628 CENPKQ9BS16 269 aa2.07□□□□□ -2.08
CHD1-207ENST00000511628 CLMPQ9H6B4 373 aa2.07□□□□□ -2.08
CHD1-207ENST00000511628 FGF20Q9NP95 211 aaPredicted RBP2.07□□□□□ -2.08
CHD1-207ENST00000511628 SLCO1B3Q9NPD5 702 aa2.07□□□□□ -2.08
CHD1-207ENST00000511628 ZNF225Q9UK10 706 aa2.07□□□□□ -2.08
CHD1-207ENST00000511628 LSM7Q9UK45 103 aaKnown RBP2.07□□□□□ -2.08
CHD1-207ENST00000511628 F11RQ9Y624 299 aaKnown RBP2.07□□□□□ -2.08
CHD1-207ENST00000511628 FANCIQ9NVI1 1328 aa2.07□□□□□ -2.08
CHD1-207ENST00000511628 CNTNAP1P78357 1384 aa2.07□□□□□ -2.08
CHD1-207ENST00000511628 ARHGAP21Q5T5U3 1957 aa2.07□□□□□ -2.08
CHD1-207ENST00000511628 IGKV6-21A0A0C4DH24 114 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 A0A1B0GVI7 797 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 EIF3HO15372 352 aaKnown RBP eCLIP2.06□□□□□ -2.08
CHD1-207ENST00000511628 ERLIN2O94905 339 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 C2P06681 752 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 ANXA5P08758 320 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 GKN3PP0CG01 181 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 TOP1P11387 765 aaKnown RBP2.06□□□□□ -2.08
CHD1-207ENST00000511628 TNNI1P19237 187 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 CNR1P21554 472 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 HSD17B2P37059 387 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 CDKN1BP46527 198 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 TFPI2P48307 235 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 LHX2P50458 406 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 RORCP51449 518 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 NCBP2P52298 156 aaKnown RBP eCLIP2.06□□□□□ -2.08
CHD1-207ENST00000511628 ACLYP53396 1101 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 SH3BGRP55822 239 aaPredicted RBP2.06□□□□□ -2.08
CHD1-207ENST00000511628 MRPS22P82650 360 aaKnown RBP2.06□□□□□ -2.08
CHD1-207ENST00000511628 CHRNA6Q15825 494 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 GUCA2BQ16661 112 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 RSPO1Q2MKA7 263 aaPredicted RBP2.06□□□□□ -2.08
CHD1-207ENST00000511628 LRRC10Q5BKY1 277 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 FRMPD2BQ6IN97 320 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 SLC8B1Q6J4K2 584 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 MKXQ8IYA7 352 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 LINC01555Q8NAE3 123 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 ACMSDQ8TDX5 336 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 TMEM54Q969K7 222 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 DUS3LQ96G46 650 aaKnown RBP2.06□□□□□ -2.08
CHD1-207ENST00000511628 RNF185Q96GF1 192 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 NRTNQ99748 197 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 RACGAP1Q9H0H5 632 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 DNTTIP1Q9H147 329 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 OR51M1Q9H341 326 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 RANBP3Q9H6Z4 567 aaPredicted RBP2.06□□□□□ -2.08
CHD1-207ENST00000511628 NANOGQ9H9S0 305 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 SLC25A37Q9NYZ2 338 aa2.06□□□□□ -2.08
CHD1-207ENST00000511628 PACSIN2Q9UNF0 486 aaPredicted RBP2.06□□□□□ -2.08
CHD1-207ENST00000511628 CDC42BPBQ9Y5S2 1711 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 MTCL1Q9Y4B5 1905 aaKnown RBP2.05□□□□□ -2.08
CHD1-207ENST00000511628 CCDC182A6NF36 153 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 F6UB75 175 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 SGK1O00141 431 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 MGRN1O60291 552 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 IGLV2-23P01705 113 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 CSF3P09919 207 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 IGHV3-43DP0DP04 118 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 CRISP2P16562 243 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 IFNA8P32881 189 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 CCNHP51946 323 aaPredicted RBP2.05□□□□□ -2.08
CHD1-207ENST00000511628 PRRX1P54821 245 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 ACTA2P62736 377 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 RPS21P63220 83 aaKnown RBP2.05□□□□□ -2.08
CHD1-207ENST00000511628 ACTG2P63267 376 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 ACTC1P68032 377 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 ACTA1P68133 377 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 ZNF92Q03936 586 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 AQP6Q13520 282 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 VPS26BQ4G0F5 336 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 SOHLH1Q5JUK2 328 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 METAP1DQ6UB28 335 aaPredicted RBP2.05□□□□□ -2.08
CHD1-207ENST00000511628 MMAAQ8IVH4 418 aaKnown RBP2.05□□□□□ -2.08
CHD1-207ENST00000511628 BBS5Q8N3I7 341 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 FBXL13Q8NEE6 735 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 SPATA4Q8NEY3 305 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 SDR42E1Q8WUS8 393 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 PLIN2Q99541 437 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 ATP5SQ99766 215 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 SLC29A1Q99808 456 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 FAM192AQ9GZU8 254 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms