RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 ERVS71-1P61550 626 aa13.63□□□□□ -0.23
CXCL1-202ENST00000509101 FOXL1Q12952 345 aa13.63□□□□□ -0.23
CXCL1-202ENST00000509101 ALG10BQ5I7T1 473 aa13.63□□□□□ -0.23
CXCL1-202ENST00000509101 NET1Q7Z628 596 aaPredicted RBP13.63□□□□□ -0.23
CXCL1-202ENST00000509101 PAQR4Q8N4S7 273 aaPredicted RBP13.63□□□□□ -0.23
CXCL1-202ENST00000509101 GTF3AQ92664 365 aaKnown RBP13.63□□□□□ -0.23
CXCL1-202ENST00000509101 SLC35B4Q969S0 331 aa13.63□□□□□ -0.23
CXCL1-202ENST00000509101 SLC41A3Q96GZ6 507 aa13.63□□□□□ -0.23
CXCL1-202ENST00000509101 ASPNQ9BXN1 380 aa13.63□□□□□ -0.23
CXCL1-202ENST00000509101 C7orf69Q9H7B7 122 aa13.63□□□□□ -0.23
CXCL1-202ENST00000509101 GPR160Q9UJ42 338 aa13.63□□□□□ -0.23
CXCL1-202ENST00000509101 HAO1Q9UJM8 370 aa13.63□□□□□ -0.23
CXCL1-202ENST00000509101 CACNG2Q9Y698 323 aa13.63□□□□□ -0.23
CXCL1-202ENST00000509101 ZNF726A6NNF4 738 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 BIRC5O15392 142 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 FSHBP01225 129 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 BGLAPP02818 100 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 SERPINA5P05154 406 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 LCKP06239 509 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 NUDT7P0C024 238 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 ARAFP10398 606 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 CCL2P13500 99 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 CRYBB2P43320 205 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 RAD52P43351 418 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 CSNK1A1P48729 337 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 SELENOVP59797 346 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 TEKQ02763 1124 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 PUDPQ08623 228 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 RBBP4Q09028 425 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 PCGF3Q3KNV8 242 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 KRT71Q3SY84 523 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 MMEL1Q495T6 779 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 USP51Q70EK9 711 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 COMTD1Q86VU5 262 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 SKA3Q8IX90 412 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 KIRREL3Q8IZU9 778 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 SCAIQ8N9R8 606 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 GLB1L3Q8NCI6 653 aaPredicted RBP13.62□□□□□ -0.23
CXCL1-202ENST00000509101 ICA1LQ8NDH6 482 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 SLC30A7Q8NEW0 376 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 BBS10Q8TAM1 723 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 SYNPRQ8TBG9 265 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 MAL2Q969L2 176 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 DUX5Q96PT3 197 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 C1QTNF5Q9BXJ0 243 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 THUMPD1Q9NXG2 353 aaKnown RBP13.62□□□□□ -0.23
CXCL1-202ENST00000509101 OPN4Q9UHM6 478 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 VWFP04275 2813 aa13.62□□□□□ -0.23
CXCL1-202ENST00000509101 IGLV3-9A0A075B6K5 115 aa13.61□□□□□ -0.23
CXCL1-202ENST00000509101 LRRN3E7EW58 273 aa13.61□□□□□ -0.23
CXCL1-202ENST00000509101 IL6P05231 212 aa13.61□□□□□ -0.23
CXCL1-202ENST00000509101 ZCCHC18P0CG32 403 aa13.61□□□□□ -0.23
CXCL1-202ENST00000509101 FPR2P25090 351 aa13.61□□□□□ -0.23
CXCL1-202ENST00000509101 EPHA3P29320 983 aa13.61□□□□□ -0.23
CXCL1-202ENST00000509101 GLO1Q04760 184 aa13.61□□□□□ -0.23
CXCL1-202ENST00000509101 PMS2P3Q13401 168 aa13.61□□□□□ -0.23
CXCL1-202ENST00000509101 TSTQ16762 297 aaKnown RBP13.61□□□□□ -0.23
CXCL1-202ENST00000509101 TREML4Q6UXN2 200 aa13.61□□□□□ -0.23
CXCL1-202ENST00000509101 SIGLECL1Q8N7X8 197 aa13.61□□□□□ -0.23
CXCL1-202ENST00000509101 LSMEM1Q8N8F7 131 aa13.61□□□□□ -0.23
CXCL1-202ENST00000509101 DNAJA4Q8WW22 397 aaPredicted RBP13.61□□□□□ -0.23
CXCL1-202ENST00000509101 MOGAT1Q96PD6 335 aa13.61□□□□□ -0.23
CXCL1-202ENST00000509101 EPYCQ99645 322 aa13.61□□□□□ -0.23
CXCL1-202ENST00000509101 GAL3ST1Q99999 423 aa13.61□□□□□ -0.23
CXCL1-202ENST00000509101 RSPO3Q9BXY4 272 aaPredicted RBP13.61□□□□□ -0.23
CXCL1-202ENST00000509101 WDR55Q9H6Y2 383 aaPredicted RBP13.61□□□□□ -0.23
CXCL1-202ENST00000509101 SAP30LQ9HAJ7 183 aa13.61□□□□□ -0.23
CXCL1-202ENST00000509101 NTN4Q9HB63 628 aa13.61□□□□□ -0.23
CXCL1-202ENST00000509101 CDH20Q9HBT6 801 aa13.61□□□□□ -0.23
CXCL1-202ENST00000509101 NKIRAS2Q9NYR9 191 aa13.61□□□□□ -0.23
CXCL1-202ENST00000509101 PRKDCP78527 4128 aaKnown RBP13.61□□□□□ -0.23
CXCL1-202ENST00000509101 SLC22A23A1A5C7 686 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 C11orf98E9PRG8 122 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 ZNF250P15622 560 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 AHCYP23526 432 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 GATA3P23771 443 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 BIDP55957 195 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 NCALDP61601 193 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 LCN2P80188 198 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 STX3Q13277 289 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 PDCD4Q53EL6 469 aaKnown RBP13.6□□□□□ -0.23
CXCL1-202ENST00000509101 C6orf10Q5SRN2 563 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 ULK3Q6PHR2 472 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 NHLRC1Q6VVB1 395 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 RBMS3Q6XE24 437 aaKnown RBP13.6□□□□□ -0.23
CXCL1-202ENST00000509101 PIWIL3Q7Z3Z3 882 aaKnown RBP13.6□□□□□ -0.23
CXCL1-202ENST00000509101 SLC22A24Q8N4F4 322 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 C10orf53Q8N6V4 93 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 OR6S1Q8NH40 331 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 DVL3Q92997 716 aaPredicted RBP13.6□□□□□ -0.23
CXCL1-202ENST00000509101 SLC47A1Q96FL8 570 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 TIMD4Q96H15 378 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 ITCHQ96J02 903 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 SH3GL3Q99963 347 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 RMND5AQ9H871 391 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 UNKLQ9H9P5 680 aaKnown RBP13.6□□□□□ -0.23
CXCL1-202ENST00000509101 BCL2L10Q9HD36 194 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 A4GALTQ9NPC4 353 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 DECR2Q9NUI1 292 aa13.6□□□□□ -0.23
CXCL1-202ENST00000509101 SLCO1C1Q9NYB5 712 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms