RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 ZNF726A6NNF4 738 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 E9PLN8 166 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 J3QKU1 62 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 AKAP8O43823 692 aaKnown RBP12.56□□□□□ -0.4
RNF4-208ENST00000507247 IL2RAP01589 272 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 TMIGD3P0DMS9 266 aaPredicted RBP12.56□□□□□ -0.4
RNF4-208ENST00000507247 GNLYP22749 145 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 PCYT1AP49585 367 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 CASP6P55212 293 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 PER3P56645 1201 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 CDC42P60953 191 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 RAP1BP61224 184 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 RAP1AP62834 184 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 SNAPC1Q16533 368 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 PHYHD1Q5SRE7 291 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 LEG1Q6P5S2 330 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 VWA1Q6PCB0 445 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 FAM214BQ7L5A3 538 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 JAZF1Q86VZ6 243 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 ENTHD1Q8IYW4 607 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 TCEANCQ8N8B7 351 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 NOXO1Q8NFA2 376 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 SLC25A44Q96H78 314 aaPredicted RBP12.56□□□□□ -0.4
RNF4-208ENST00000507247 ZFP3Q96NJ6 502 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 MUS81Q96NY9 551 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 SLC38A2Q96QD8 506 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 IL4I1Q96RQ9 567 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 VKORC1Q9BQB6 163 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 FN3KQ9H479 309 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 C12orf49Q9H741 205 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 HINT3Q9NQE9 182 aaKnown RBP12.56□□□□□ -0.4
RNF4-208ENST00000507247 AASSQ9UDR5 926 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 FOXD3Q9UJU5 478 aaPredicted RBP12.56□□□□□ -0.4
RNF4-208ENST00000507247 RAB26Q9ULW5 256 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 RNF6Q9Y252 685 aa12.56□□□□□ -0.4
RNF4-208ENST00000507247 IGKV1D-43A0A0B4J1Z2 117 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 A0A0G2JNJ9 132 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 SLC22A23A1A5C7 686 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 PRSS37A4D1T9 235 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 OR6C68A6NDL8 312 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 FAM183AA6NL82 134 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 RIIAD1A6NNX1 92 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 XKRYO14609 159 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 MRPL33O75394 65 aaKnown RBP12.55□□□□□ -0.4
RNF4-208ENST00000507247 TNFSF13O75888 250 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 IFNGP01579 166 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 IGHG1P01857 330 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 ZNF3P17036 446 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 GABRB1P18505 474 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 FMODQ06828 376 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 ITGADQ13349 1161 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 IL18R1Q13478 541 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 EIF2S3LQ2VIR3 472 aaKnown RBP12.55□□□□□ -0.4
RNF4-208ENST00000507247 RIPPLY2Q5TAB7 128 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 HDDC2Q7Z4H3 204 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 BCDIN3DQ7Z5W3 292 aaKnown RBP12.55□□□□□ -0.4
RNF4-208ENST00000507247 ADCK1Q86TW2 530 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 CNEP1R1Q8N9A8 125 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 SYT14Q8NB59 555 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 TMEM163Q8TC26 289 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 TMEM54Q969K7 222 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 ZNF566Q969W8 418 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 NMD3Q96D46 503 aaKnown RBP12.55□□□□□ -0.4
RNF4-208ENST00000507247 PLEKHA8Q96JA3 519 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 SNX18Q96RF0 628 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 ALG12Q9BV10 488 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 HCAR1Q9BXC0 346 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 TEX12Q9BXU0 123 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 ANKRD60Q9BZ19 345 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 PRRG3Q9BZD7 231 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 SYT4Q9H2B2 425 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 MED20Q9H944 212 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 IMPAD1Q9NX62 359 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 VSX1Q9NZR4 365 aaPredicted RBP12.55□□□□□ -0.4
RNF4-208ENST00000507247 Q9UFV3 132 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 EMC9Q9Y3B6 208 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 TENM4Q6N022 2769 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 NCOA6Q14686 2063 aaPredicted RBP12.55□□□□□ -0.4
RNF4-208ENST00000507247 ESPL1Q14674 2120 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 MYO7BQ6PIF6 2116 aa12.55□□□□□ -0.4
RNF4-208ENST00000507247 POLEQ07864 2286 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 DCTN6O00399 190 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 CCL21O00585 134 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 TLX2O43763 284 aaPredicted RBP12.54□□□□□ -0.4
RNF4-208ENST00000507247 SLC43A1O75387 559 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 UPK3AO75631 287 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 IGHV3-9P01782 118 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 CRHP06850 196 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 OR3A2P47893 321 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 CSNK1A1P48729 337 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 CLRN1P58418 232 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 ISL1P61371 349 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 CD47Q08722 323 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 HIST3H3Q16695 136 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 TSPO2Q5TGU0 170 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 TMEM211Q6ICI0 200 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 PLBD1Q6P4A8 553 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 TFAP2EQ6VUC0 442 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 LINGO2Q7L985 606 aa12.54□□□□□ -0.4
RNF4-208ENST00000507247 BTLAQ7Z6A9 289 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms