RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 TRAV27A0A087WT01 109 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 A0A096LPE4 126 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 A0A1W2PPZ6 126 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 DPRXA6NFQ7 191 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 EFCAB9A8MZ26 197 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 RPL36A-HNRNPH2H7BZ11 118 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 M0R1B8 84 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 SEC14L2O76054 403 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 BCL10O95999 233 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 GPR4P46093 362 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 PRPS1P60891 318 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 UBE2NP61088 152 aaKnown RBP11.47□□□□□ -0.57
TCOF1-209ENST00000506630 ARF1P84077 181 aaKnown RBP11.47□□□□□ -0.57
TCOF1-209ENST00000506630 PRKCDQ05655 676 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 MTX3Q5HYI7 312 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 ADAM5Q6NVV9 412 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 PODNL1Q6PEZ8 512 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 TBPL2Q6SJ96 375 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 KLHL17Q6TDP4 642 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 NHLRC1Q6VVB1 395 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 RNF113BQ8IZP6 322 aaKnown RBP11.47□□□□□ -0.57
TCOF1-209ENST00000506630 WDR31Q8NA23 367 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 KBTBD8Q8NFY9 601 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 OR52J3Q8NH60 311 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 OR6X1Q8NH79 312 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 MOSPD2Q8NHP6 518 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 ZNF566Q969W8 418 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 ZNF837Q96EG3 531 aaPredicted RBP11.47□□□□□ -0.57
TCOF1-209ENST00000506630 CLPTM1LQ96KA5 538 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 LRR1Q96L50 414 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 SEPHS2Q99611 448 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 TMEM204Q9BSN7 226 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 THTPAQ9BU02 230 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 HIF3AQ9Y2N7 669 aa11.47□□□□□ -0.57
TCOF1-209ENST00000506630 MAGED1Q9Y5V3 778 aaPredicted RBP11.47□□□□□ -0.57
TCOF1-209ENST00000506630 TRBV4-1A0A0J9YWV2 114 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 A0A1W2PRQ8 180 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 HTR3EA5X5Y0 456 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 ZNF99A8MXY4 864 aaPredicted RBP11.46□□□□□ -0.57
TCOF1-209ENST00000506630 ABCD4O14678 606 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 GYG2O15488 501 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 STAMBPO95630 424 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 SLC9A3P48764 834 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 DAP3P51398 398 aaKnown RBP11.46□□□□□ -0.57
TCOF1-209ENST00000506630 CLRN1P58418 232 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 TUBA1BP68363 451 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 TUBA4AP68366 448 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 TOP3AQ13472 1001 aaPredicted RBP11.46□□□□□ -0.57
TCOF1-209ENST00000506630 DGCR6Q14129 220 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 TRIM25Q14258 630 aaKnown RBP11.46□□□□□ -0.57
TCOF1-209ENST00000506630 LAPTM4AQ15012 233 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 ACKR1Q16570 336 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 ALG10Q5BKT4 473 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 LCN8Q6JVE9 175 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 ANKRD16Q6P6B7 361 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 TMEM108Q6UXF1 575 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 C20orf204Q6ZNR8 217 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 TUBA1AQ71U36 451 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 HDDC2Q7Z4H3 204 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 OAFQ86UD1 273 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 DHFR2Q86XF0 187 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 ZDHHC21Q8IVQ6 265 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 NOXO1Q8NFA2 376 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 OR13C2Q8NGS9 318 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 SLC7A13Q8TCU3 470 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 ASB10Q8WXI3 467 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 AKAP1Q92667 903 aaKnown RBP eCLIP11.46□□□□□ -0.57
TCOF1-209ENST00000506630 BCL2L2Q92843 193 aaPredicted RBP11.46□□□□□ -0.57
TCOF1-209ENST00000506630 FAM46AQ96IP4 442 aaKnown RBP11.46□□□□□ -0.57
TCOF1-209ENST00000506630 LRGUKQ96M69 825 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 CCL19Q99731 98 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 NELFAQ9H3P2 528 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 OBP2BQ9NPH6 170 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 KRCC1Q9NPI7 259 aaPredicted RBP11.46□□□□□ -0.57
TCOF1-209ENST00000506630 TMEM5Q9Y2B1 443 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 POFUT2Q9Y2G5 429 aa11.46□□□□□ -0.57
TCOF1-209ENST00000506630 TCRBV5S2A0A599 114 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 TRIM64A6NGJ6 449 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 TRIM64BA6NI03 449 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 CDC42EP2O14613 210 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 HS3ST1O14792 307 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 GADD45GO95257 159 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 IGHG1P01857 330 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 TSPAN19P0C672 248 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 PGA4P0DJD7 388 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 PGA3P0DJD8 388 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 PTAFRP25105 342 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 RRM2P31350 389 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 CAPZA2P47755 286 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 SMIM11AP58511 58 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 MS4A2Q01362 244 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 SPOCK1Q08629 439 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 IQCCQ4KMZ1 466 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 DNAL1Q4LDG9 190 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 IGFN1Q86VF2 1251 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 OR4K5Q8NGD3 323 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 OR51A7Q8NH64 312 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 NEUROG1Q92886 237 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 TMEM54Q969K7 222 aa11.45□□□□□ -0.58
TCOF1-209ENST00000506630 ASB9Q96DX5 294 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms