RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 SYNGR4O95473 234 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 MT-ND5P03915 603 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 SCG5P05408 212 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 LIMS3P0CW19 117 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 LIMS4P0CW20 117 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 CLUP10909 449 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 SPINK2P20155 84 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 PYCR1P32322 319 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 MAGEA5P43359 124 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 BIDP55957 195 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 H3F3AP84243 136 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 GLO1Q04760 184 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 ACSM1Q08AH1 577 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 MELKQ14680 651 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 CNPY1Q3B7I2 92 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 THEM4Q5T1C6 240 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 LRRC69Q6ZNQ3 347 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 CHMP1BQ7LBR1 199 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 SHFQ7M4L6 423 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 SLC16A9Q7RTY1 509 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 LHFPL3Q86UP9 236 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 ZBTB46Q86UZ6 589 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 SLC35F2Q8IXU6 374 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 PM20D2Q8IYS1 436 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 GHDCQ8N2G8 530 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 EXD3Q8N9H8 876 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 OR6X1Q8NH79 312 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 UFD1Q92890 307 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 ABTB1Q969K4 478 aaPredicted RBP10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 INTS12Q96CB8 462 aaKnown RBP10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 YIPF6Q96EC8 236 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 SLC25A44Q96H78 314 aaPredicted RBP10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 DOK1Q99704 481 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 ALG8Q9BVK2 526 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 YIPF3Q9GZM5 350 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 RERGLQ9H628 205 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 PTTG2Q9NZH5 202 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 CLEC2DQ9UHP7 191 aa10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 LSM2Q9Y333 95 aaKnown RBP10.76□□□□□ -0.69
POLR2J3-211ENST00000506060 SPTBN2O15020 2390 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 H7C1C5 153 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 TFECO14948 347 aaPredicted RBP10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 TMCC2O75069 709 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 GABARAPO95166 117 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 HLA-DQA2P01906 255 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 MRPL3P09001 348 aaKnown RBP10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 TACSTD2P09758 323 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 HLA-DOBP13765 273 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 PSMA1P25786 263 aaKnown RBP10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 GUCA1AP43080 201 aaPredicted RBP10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 EIF1AXP47813 144 aaKnown RBP10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 CD97P48960 835 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 RGS6P49758 472 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 P2RY4P51582 365 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 LCN6P62502 163 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 MRPL28Q13084 256 aaKnown RBP10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 TSTQ16762 297 aaKnown RBP10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 ZNF322Q6U7Q0 402 aaPredicted RBP10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 IGFL3Q6UXB1 125 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 GDPGP1Q6ZNW5 385 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 PLEKHG7Q6ZR37 379 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 KCTD20Q7Z5Y7 419 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 ERI1Q8IV48 349 aaKnown RBP10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 UBQLNLQ8IYU4 475 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 OR6V1Q8N148 313 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 SYS1Q8N2H4 156 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 KDM8Q8N371 416 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 OR51L1Q8NGJ5 315 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 OR10D3Q8NH80 312 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 ZPLD1Q8TCW7 415 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 SNX33Q8WV41 574 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 C12orf43Q96C57 262 aaKnown RBP10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 NMD3Q96D46 503 aaKnown RBP10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 OR5M11Q96RB7 305 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 INTS14Q96SY0 518 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 KCNK17Q96T54 332 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 ARHGAP9Q9BRR9 750 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 NUAK2Q9H093 628 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 TSPAN10Q9H1Z9 355 aaPredicted RBP10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 TRIM36Q9NQ86 728 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 TAS2R16Q9NYV7 291 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 B3GAT1Q9P2W7 334 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 MCTS1Q9ULC4 181 aaKnown RBP10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 B9D1Q9UPM9 204 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 WASF3Q9UPY6 502 aa10.75□□□□□ -0.69
POLR2J3-211ENST00000506060 ACACAQ13085 2346 aa10.74□□□□□ -0.69
POLR2J3-211ENST00000506060 TRGV5A0A0B4J1U4 118 aa10.74□□□□□ -0.69
POLR2J3-211ENST00000506060 H3BMQ9 156 aa10.74□□□□□ -0.69
POLR2J3-211ENST00000506060 GPR171O14626 319 aa10.74□□□□□ -0.69
POLR2J3-211ENST00000506060 TRAF3IP2O43734 574 aaPredicted RBP10.74□□□□□ -0.69
POLR2J3-211ENST00000506060 AIREO43918 545 aa10.74□□□□□ -0.69
POLR2J3-211ENST00000506060 CXCL13O43927 109 aa10.74□□□□□ -0.69
POLR2J3-211ENST00000506060 ZNF823P16415 610 aa10.74□□□□□ -0.69
POLR2J3-211ENST00000506060 CPEP16870 476 aa10.74□□□□□ -0.69
POLR2J3-211ENST00000506060 ZNF24P17028 368 aa10.74□□□□□ -0.69
POLR2J3-211ENST00000506060 LIPAP38571 399 aa10.74□□□□□ -0.69
POLR2J3-211ENST00000506060 RFC3P40938 356 aa10.74□□□□□ -0.69
POLR2J3-211ENST00000506060 NAA10P41227 235 aaPredicted RBP10.74□□□□□ -0.69
POLR2J3-211ENST00000506060 GBX2P52951 348 aaPredicted RBP10.74□□□□□ -0.69
POLR2J3-211ENST00000506060 CLDN20P56880 219 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms