RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 ADGRG4Q8IZF6 3080 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 DEFB108AA8MXU0 73 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 ANKRD65E5RJM6 399 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 TNFRSF11BO00300 401 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 DHHO43323 396 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 PRSS23O95084 383 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 IGHV3-9P01782 118 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 CD14P08571 375 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 ITGA5P08648 1049 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 FCGR1AP12314 374 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 CBR1P16152 277 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 TNFRSF1BP20333 461 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 CRABP1P29762 137 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 SLC6A6P31641 620 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 CCKARP32238 428 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 MAGEA2P43356 314 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 YAP1P46937 504 aaKnown RBP8.65□□□□□ -1.02
NR1I3-220ENST00000505005 CENPAP49450 140 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 CTXN1P60606 82 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 ACTR3P61158 418 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 RPS4XP62701 263 aaKnown RBP8.65□□□□□ -1.02
NR1I3-220ENST00000505005 PLP2Q04941 152 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 CAMK2DQ13557 499 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 CEACAM16Q2WEN9 425 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 TBRG1Q3YBR2 411 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 AGAP6Q5VW22 663 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 ZNF544Q6NX49 715 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 TMEM53Q6P2H8 277 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 PODNL1Q6PEZ8 512 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 PAMR1Q6UXH9 720 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 WDR88Q6ZMY6 472 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 ZNF704Q6ZNC4 412 aaPredicted RBP8.65□□□□□ -1.02
NR1I3-220ENST00000505005 SLC46A3Q7Z3Q1 461 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 SYT9Q86SS6 491 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 TMEM123Q8N131 208 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 OR4K5Q8NGD3 323 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 OR52L1Q8NGH7 329 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 TMEM171Q8WVE6 324 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 BCL2L2Q92843 193 aaPredicted RBP8.65□□□□□ -1.02
NR1I3-220ENST00000505005 TMEM54Q969K7 222 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 SNX18Q96RF0 628 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 GPX7Q96SL4 187 aaPredicted RBP8.65□□□□□ -1.02
NR1I3-220ENST00000505005 FOXB1Q99853 325 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 TMEM204Q9BSN7 226 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 OSBPL10Q9BXB5 764 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 PLEKHF2Q9H8W4 249 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 ZNF556Q9HAH1 456 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 SLC7A8Q9UHI5 535 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 ENOPH1Q9UHY7 261 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 POU2F3Q9UKI9 436 aa8.65□□□□□ -1.02
NR1I3-220ENST00000505005 DHRS12A0PJE2 317 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 ARRDC5A6NEK1 342 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 UNC119BA6NIH7 251 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 hCG_2039718K7EN88 272 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 M0R3G1 203 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 HS3ST1O14792 307 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 FFAR1O14842 300 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 FKBP6O75344 327 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 DEAF1O75398 565 aaPredicted RBP8.64□□□□□ -1.03
NR1I3-220ENST00000505005 UPK3AO75631 287 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 PDE5AO76074 875 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 RAB36O95755 333 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 SEMG1P04279 462 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 THBDP07204 575 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 ERCC1P07992 297 aaPredicted RBP8.64□□□□□ -1.03
NR1I3-220ENST00000505005 PGA4P0DJD7 388 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 PGA3P0DJD8 388 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 PRF1P14222 555 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 TUBG1P23258 451 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 FPR3P25089 353 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 CD40P25942 277 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 NOS3P29474 1203 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 AQP2P41181 271 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 PTDSS1P48651 473 aaKnown RBP8.64□□□□□ -1.03
NR1I3-220ENST00000505005 ZNF133P52736 654 aaPredicted RBP8.64□□□□□ -1.03
NR1I3-220ENST00000505005 SELENOVP59797 346 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 RPS23P62266 143 aaKnown RBP8.64□□□□□ -1.03
NR1I3-220ENST00000505005 VLDLRP98155 873 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 TSPAN31Q12999 210 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 MOGQ16653 247 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 HIST3H3Q16695 136 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 GSG1Q2KHT4 349 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 C10orf128Q5T292 105 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 SHEQ5VZ18 495 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 DMRTA1Q5VZB9 504 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 HIST2H2BCQ6DN03 193 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 OR2T5Q6IEZ7 315 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 C1orf94Q6P1W5 598 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 SMARCD3Q6STE5 483 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 ARL9Q6T311 187 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 SLC22A25Q6T423 547 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 PRSS57Q6UWY2 283 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 CYP2R1Q6VVX0 501 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 ZNF813Q6ZN06 617 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 P3H2Q8IVL5 708 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 CLDN22Q8N7P3 220 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 ARIH2OSQ8N7S6 290 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 NOXO1Q8NFA2 376 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 OR2T29Q8NH02 315 aa8.64□□□□□ -1.03
NR1I3-220ENST00000505005 OR52N5Q8NH56 324 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms