RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 PRAMEF20Q5VT98 475 aa19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 PAMR1Q6UXH9 720 aa19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 DND1Q8IYX4 353 aaKnown RBP19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 ZNF248Q8NDW4 579 aa19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 SRRQ9GZT4 340 aa19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 ALKBH4Q9NXW9 302 aa19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 PAIP2BQ9ULR5 123 aaKnown RBP19.19■□□□□ 0.66
UBE2D3-216ENST00000503742 H3BML4 177 aa19.18■□□□□ 0.66
UBE2D3-216ENST00000503742 PSMD9O00233 223 aa19.18■□□□□ 0.66
UBE2D3-216ENST00000503742 GPRIN2O60269 458 aa19.18■□□□□ 0.66
UBE2D3-216ENST00000503742 GPANK1O95872 356 aa19.18■□□□□ 0.66
UBE2D3-216ENST00000503742 TFPIP10646 304 aa19.18■□□□□ 0.66
UBE2D3-216ENST00000503742 CENPAP49450 140 aa19.18■□□□□ 0.66
UBE2D3-216ENST00000503742 CBX3Q13185 183 aa19.18■□□□□ 0.66
UBE2D3-216ENST00000503742 MELKQ14680 651 aa19.18■□□□□ 0.66
UBE2D3-216ENST00000503742 ZMAT1Q5H9K5 638 aa19.18■□□□□ 0.66
UBE2D3-216ENST00000503742 OR4K17Q8NGC6 315 aa19.18■□□□□ 0.66
UBE2D3-216ENST00000503742 OR6N2Q8NGY6 317 aa19.18■□□□□ 0.66
UBE2D3-216ENST00000503742 ASB10Q8WXI3 467 aa19.18■□□□□ 0.66
UBE2D3-216ENST00000503742 ANGPTL4Q9BY76 406 aa19.18■□□□□ 0.66
UBE2D3-216ENST00000503742 SERINC1Q9NRX5 453 aa19.18■□□□□ 0.66
UBE2D3-216ENST00000503742 COMMD3Q9UBI1 195 aa19.18■□□□□ 0.66
UBE2D3-216ENST00000503742 A0A1W2PNU3 283 aaPredicted RBP19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 C9orf172C9J069 976 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 BOLA2-SMG1P6H3BVE0 249 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 UPK3AO75631 287 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 TACSTD2P09758 323 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 JMJD7P0C870 316 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 PSKH1P11801 424 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 CTLA4P16410 223 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 MYL9P24844 172 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 ADH6P28332 368 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 NANOS3P60323 173 aaKnown RBP19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 HBMQ6B0K9 141 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 C3orf33Q6P1S2 294 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 UNQ9370/PRO34162Q6UXP9 181 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 DPY19L4Q7Z388 723 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 PAQR8Q8TEZ7 354 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 DIRAS2Q96HU8 199 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 PTGES2Q9H7Z7 377 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 SP140LQ9H930 580 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 PROK2Q9HC23 129 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 RYDENQ9NUL5 291 aaKnown RBP19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 LAMP5Q9UJQ1 280 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 B3GALT5Q9Y2C3 310 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 TMEM14AQ9Y6G1 99 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 TRAV1-2A0A0B4J238 106 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 A0A0G2JK05 382 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 A6NIZ1 184 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 MASP2O00187 686 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 SLC16A7O60669 478 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 OR8G3PP0DMU2 310 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 BLVRAP53004 296 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 RAP1BP61224 184 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 RAP1AP62834 184 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 FOXK1P85037 733 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 TLE3Q04726 772 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 EGR3Q06889 387 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 MYBPHQ13203 477 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 SSPNQ14714 243 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 TRILQ7L0X0 811 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 PLCZ1Q86YW0 608 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 OTOSQ8NHW6 89 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 HAVCR2Q8TDQ0 301 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 ACOT12Q8WYK0 555 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 PDCD1LG2Q9BQ51 273 aa19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 FARSAQ9Y285 508 aaKnown RBP19.17■□□□□ 0.66
UBE2D3-216ENST00000503742 FAM47E-STBD1D6RA91 191 aa19.16■□□□□ 0.66
UBE2D3-216ENST00000503742 GATBO75879 557 aaKnown RBP19.16■□□□□ 0.66
UBE2D3-216ENST00000503742 UCHL1P09936 223 aa19.16■□□□□ 0.66
UBE2D3-216ENST00000503742 CCL3P10147 92 aa19.16■□□□□ 0.66
UBE2D3-216ENST00000503742 EIF1P41567 113 aaKnown RBP19.16■□□□□ 0.66
UBE2D3-216ENST00000503742 CDC20Q12834 499 aa19.16■□□□□ 0.66
UBE2D3-216ENST00000503742 MRPL28Q13084 256 aaKnown RBP19.16■□□□□ 0.66
UBE2D3-216ENST00000503742 CHAF1BQ13112 559 aa19.16■□□□□ 0.66
UBE2D3-216ENST00000503742 LIPNQ5VXI9 398 aa19.16■□□□□ 0.66
UBE2D3-216ENST00000503742 MZT2AQ6P582 158 aa19.16■□□□□ 0.66
UBE2D3-216ENST00000503742 NHLRC1Q6VVB1 395 aa19.16■□□□□ 0.66
UBE2D3-216ENST00000503742 POC5Q8NA72 575 aa19.16■□□□□ 0.66
UBE2D3-216ENST00000503742 SOSTQ9BQB4 213 aa19.16■□□□□ 0.66
UBE2D3-216ENST00000503742 EDEM2Q9BV94 578 aa19.16■□□□□ 0.66
UBE2D3-216ENST00000503742 TSPAN10Q9H1Z9 355 aaPredicted RBP19.16■□□□□ 0.66
UBE2D3-216ENST00000503742 MRPL22Q9NWU5 206 aaKnown RBP19.16■□□□□ 0.66
UBE2D3-216ENST00000503742 A0A1W2PNV4 684 aa19.15■□□□□ 0.66
UBE2D3-216ENST00000503742 FABP12A6NFH5 140 aa19.15■□□□□ 0.66
UBE2D3-216ENST00000503742 PHYHO14832 338 aa19.15■□□□□ 0.66
UBE2D3-216ENST00000503742 GALR2O43603 387 aaPredicted RBP19.15■□□□□ 0.66
UBE2D3-216ENST00000503742 IFNGR1P15260 489 aa19.15■□□□□ 0.66
UBE2D3-216ENST00000503742 OTX2P32243 289 aa19.15■□□□□ 0.66
UBE2D3-216ENST00000503742 DAP3P51398 398 aaKnown RBP19.15■□□□□ 0.66
UBE2D3-216ENST00000503742 Q0VFX4 171 aa19.15■□□□□ 0.66
UBE2D3-216ENST00000503742 XKRXQ6PP77 449 aa19.15■□□□□ 0.66
UBE2D3-216ENST00000503742 FAM131AQ6UXB0 335 aa19.15■□□□□ 0.66
UBE2D3-216ENST00000503742 FAM220AQ7Z4H9 259 aa19.15■□□□□ 0.66
UBE2D3-216ENST00000503742 ADPRHL1Q8NDY3 354 aa19.15■□□□□ 0.66
UBE2D3-216ENST00000503742 OR5M1Q8NGP8 315 aa19.15■□□□□ 0.66
UBE2D3-216ENST00000503742 KIAA1143Q96AT1 154 aaPredicted RBP19.15■□□□□ 0.66
UBE2D3-216ENST00000503742 ZBTB8AQ96BR9 441 aa19.15■□□□□ 0.66
UBE2D3-216ENST00000503742 MAP6Q96JE9 813 aa19.15■□□□□ 0.66
UBE2D3-216ENST00000503742 TMEM9BQ9NQ34 198 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms