RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 UQCRC2P22695 453 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 CXCR1P25024 350 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 FPR2P25090 351 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 MPGP29372 298 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 CALCRP30988 508 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 CHI3L1P36222 383 aaPredicted RBP4.76□□□□□ -1.65
SPTA1-209ENST00000498708 SERPINF1P36955 418 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 CAPZA2P47755 286 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 SELENOPP49908 381 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 BLVRAP53004 296 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 SLC16A1P53985 500 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 CLDN8P56748 225 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 UBE2NP61088 152 aaKnown RBP4.76□□□□□ -1.65
SPTA1-209ENST00000498708 HPCAP84074 193 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 TGFBR3Q03167 851 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 NPRL3Q12980 569 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 SLC17A1Q14916 467 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 TRIP10Q15642 601 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 ADIPOQQ15848 244 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 KRT71Q3SY84 523 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 ATG16L1Q676U5 607 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 TMEM225Q6GV28 225 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 NIPAL3Q6P499 406 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 RNF165Q6ZSG1 346 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 RHOUQ7L0Q8 258 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 SSX8Q7RTT4 187 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 NATD1Q8N6N6 113 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 TRIML2Q8N7C3 387 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 ZIC4Q8N9L1 334 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 OR9K2Q8NGE7 335 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 OR8H1Q8NGG4 311 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 OR1K1Q8NGR3 316 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 PSMA8Q8TAA3 256 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 PNPT1Q8TCS8 783 aaKnown RBP4.76□□□□□ -1.65
SPTA1-209ENST00000498708 TCP10LQ8TDR4 215 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 WDR60Q8WVS4 1066 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 SGCDQ92629 289 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 SLC25A36Q96CQ1 311 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 DUX5Q96PT3 197 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 ALKBH3Q96Q83 286 aaPredicted RBP4.76□□□□□ -1.65
SPTA1-209ENST00000498708 SLC38A2Q96QD8 506 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 CCT8L2Q96SF2 557 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 SLC35A5Q9BS91 424 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 TAPBPLQ9BX59 468 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 KRTAP3-1Q9BYR8 98 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 NSRP1Q9H0G5 558 aaKnown RBP4.76□□□□□ -1.65
SPTA1-209ENST00000498708 TPK1Q9H3S4 243 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 LPAR2Q9HBW0 351 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 CA10Q9NS85 328 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 TMEM45AQ9NWC5 275 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 PARPBPQ9NWS1 579 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 MARCOQ9UEW3 520 aaPredicted RBP4.76□□□□□ -1.65
SPTA1-209ENST00000498708 GTF2A1LQ9UNN4 478 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 SLC35A3Q9Y2D2 325 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 SPEF1Q9Y4P9 236 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 LOC105371242A0A075B767 164 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 PRSS47A8MTI9 375 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 B9A039 149 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 ZNF587BE7ETH6 402 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 G3V4G9 280 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 hCG_2039718K7EN88 272 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 HMGN4O00479 90 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 EIF1BO60739 113 aaKnown RBP4.75□□□□□ -1.65
SPTA1-209ENST00000498708 SCG5P05408 212 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 GPIP06744 558 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 CHRM4P08173 479 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 TACSTD2P09758 323 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 CECR9P0C854 216 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 DAOP14920 347 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 IL7RP16871 459 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 TCN1P20061 433 aaPredicted RBP4.75□□□□□ -1.65
SPTA1-209ENST00000498708 MDKP21741 143 aaPredicted RBP4.75□□□□□ -1.65
SPTA1-209ENST00000498708 GCH1P30793 250 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 PRKAR1BP31321 381 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 THBS4P35443 961 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 KHKP50053 298 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 IDH3GP51553 393 aaPredicted RBP4.75□□□□□ -1.65
SPTA1-209ENST00000498708 POLR2HP52434 150 aaKnown RBP4.75□□□□□ -1.65
SPTA1-209ENST00000498708 CHN2P52757 468 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 CLDN17P56750 224 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 IL1RL1Q01638 556 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 NAAAQ02083 359 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 EMX2Q04743 252 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 RELQ04864 619 aaPredicted RBP4.75□□□□□ -1.65
SPTA1-209ENST00000498708 EPS8Q12929 822 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 MAD2L1Q13257 205 aaPredicted RBP4.75□□□□□ -1.65
SPTA1-209ENST00000498708 SCGB2A2Q13296 93 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 DYNC1I2Q13409 638 aaKnown RBP4.75□□□□□ -1.65
SPTA1-209ENST00000498708 ADRM1Q16186 407 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 BEAN1Q3B7T3 259 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 SMUG1Q53HV7 270 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 SPANXN4Q5MJ08 99 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 MRPL2Q5T653 305 aaKnown RBP4.75□□□□□ -1.65
SPTA1-209ENST00000498708 SAXO2Q658L1 398 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 KRT80Q6KB66 452 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 ANKRD16Q6P6B7 361 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 C16orf54Q6UWD8 224 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 LINGO2Q7L985 606 aa4.75□□□□□ -1.65
SPTA1-209ENST00000498708 MYPOPQ86VE0 399 aaPredicted RBP4.75□□□□□ -1.65
SPTA1-209ENST00000498708 CARM1Q86X55 608 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms