RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ZIC1Q15915 447 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 TNXAQ16473 311 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 CDKL4Q5MAI5 379 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 TIGD3Q6B0B8 471 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 CTRB2Q6GPI1 263 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 ZNF621Q6ZSS3 439 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 CDKL3Q8IVW4 592 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-224ENST00000497488 METTL4Q8N3J2 472 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 OR10V1Q8NGI7 309 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 OR1S2Q8NGQ3 325 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 ZNF461Q8TAF7 563 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 FNDC8Q8TC99 324 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 TMEM239Q8WW34 195 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 FAM122AQ96E09 287 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 CELF6Q96J87 481 aaKnown RBP5.08□□□□□ -1.6
BRCA1-224ENST00000497488 OXGR1Q96P68 337 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 TNFRSF13CQ96RJ3 184 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 POTEKPQ9BYX7 375 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 ZYG11BQ9C0D3 744 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 NAT10Q9H0A0 1025 aaKnown RBP5.08□□□□□ -1.6
BRCA1-224ENST00000497488 DEFB129Q9H1M3 183 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 SIX2Q9NPC8 291 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 ZFP57Q9NU63 452 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 EMC3Q9P0I2 261 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 CLEC2DQ9UHP7 191 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 YARS2Q9Y2Z4 477 aaKnown RBP5.08□□□□□ -1.6
BRCA1-224ENST00000497488 KDM3BQ7LBC6 1761 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 GOLGB1Q14789 3259 aaKnown RBP5.08□□□□□ -1.6
BRCA1-224ENST00000497488 USP42Q9H9J4 1324 aaKnown RBP5.07□□□□□ -1.6
BRCA1-224ENST00000497488 LY6G6EA0A0G2JKS1 128 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 SLC22A20A6NK97 555 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 VSTM2BA6NLU5 285 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 NPIPB8E9PQR5 432 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 NPIPB9F8W1W9 429 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 MKRN2OSH3BPM6 223 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 LGALS2P05162 132 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 KRT16P08779 473 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 HOXD4P09016 255 aaPredicted RBP5.07□□□□□ -1.6
BRCA1-224ENST00000497488 WNT2P09544 360 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 SERPINA2P20848 420 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 LEPP41159 167 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 TSFMP43897 325 aaKnown RBP5.07□□□□□ -1.6
BRCA1-224ENST00000497488 PDLIM4P50479 330 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 ELLP55199 621 aaPredicted RBP5.07□□□□□ -1.6
BRCA1-224ENST00000497488 ATP6V0D1P61421 351 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 ZNF154Q13106 437 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 DPYSL3Q14195 570 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 OXA1LQ15070 435 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 GABRA6Q16445 453 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 ECSCRQ19T08 205 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 PAN3Q58A45 887 aaKnown RBP5.07□□□□□ -1.6
BRCA1-224ENST00000497488 LINC00336Q6ZUF6 198 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 PGAP1Q75T13 922 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 CHMP1BQ7LBR1 199 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 MTURNQ8N3F0 131 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 OR9A4Q8NGU2 314 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 LGALS14Q8TCE9 139 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 ACOT11Q8WXI4 607 aaPredicted RBP5.07□□□□□ -1.6
BRCA1-224ENST00000497488 TFGQ92734 400 aaPredicted RBP5.07□□□□□ -1.6
BRCA1-224ENST00000497488 NEIL2Q969S2 332 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 RAB3CQ96E17 227 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 WBP1Q96G27 269 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 CABLES2Q9BTV7 478 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 OSBPL10Q9BXB5 764 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 HOXD1Q9GZZ0 328 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 PPDPFQ9H3Y8 114 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 C1orf198Q9H425 327 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 RBKSQ9H477 322 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 BEX1Q9HBH7 125 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 RETNQ9HD89 108 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 NECAP2Q9NVZ3 263 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 LNPEPQ9UIQ6 1025 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 URGCP-MRPS24S4R325 110 aa5.07□□□□□ -1.6
BRCA1-224ENST00000497488 KIAA1551Q9HCM1 1747 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 TRBV5-4A0A0C4DH59 114 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 IQCMA0A1B0GVH7 501 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 A0A1W2PRF3 423 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 A0A1W2PRM7 423 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 SAGE2PA6NJ88 616 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 RAD51BO15315 384 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 HDAC3O15379 428 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 B4GALT5O43286 388 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 ZMPSTE24O75844 475 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 AHSA1O95433 338 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 STSP08842 583 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 OR9G9P0C7N8 305 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 PSG1P11464 419 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 DAOP14920 347 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 SELEP16581 610 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 IVDP26440 423 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 DDOSTP39656 456 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 AQP2P41181 271 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 CYLC2Q14093 348 aaPredicted RBP5.06□□□□□ -1.6
BRCA1-224ENST00000497488 FASTKQ14296 549 aaKnown RBP5.06□□□□□ -1.6
BRCA1-224ENST00000497488 MLF2Q15773 248 aaPredicted RBP5.06□□□□□ -1.6
BRCA1-224ENST00000497488 UPP1Q16831 310 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 C5orf47Q569G3 176 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 VWA2Q5GFL6 755 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 LINC00242Q5T6M2 205 aa5.06□□□□□ -1.6
BRCA1-224ENST00000497488 OR2W3Q7Z3T1 314 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms