RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 ARIH2OSQ8N7S6 290 aa16.22■□□□□ 0.19
TSSC4-210ENST00000496468 POMGNT2Q8NAT1 580 aa16.22■□□□□ 0.19
TSSC4-210ENST00000496468 OR6N1Q8NGY5 312 aa16.22■□□□□ 0.19
TSSC4-210ENST00000496468 OR4Q3Q8NH05 313 aa16.22■□□□□ 0.19
TSSC4-210ENST00000496468 VCXQ9H320 206 aa16.22■□□□□ 0.19
TSSC4-210ENST00000496468 B3GAT2Q9NPZ5 323 aa16.22■□□□□ 0.19
TSSC4-210ENST00000496468 UPB1Q9UBR1 384 aa16.22■□□□□ 0.19
TSSC4-210ENST00000496468 MALT1Q9UDY8 824 aa16.22■□□□□ 0.19
TSSC4-210ENST00000496468 CENPBD1B2RD01 187 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 ZNF587BE7ETH6 402 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 IMPA2O14732 288 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 ARPC3O15145 178 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 IDH3BO43837 385 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 TRMUO75648 421 aaKnown RBP16.21■□□□□ 0.19
TSSC4-210ENST00000496468 TXNDC12O95881 172 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 NR2C1P13056 603 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 CRISP1P54107 249 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 RUNX1T1Q06455 604 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 LGALS3BPQ08380 585 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 CD47Q08722 323 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 FBXW9Q5XUX1 488 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 BEND4Q6ZU67 534 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 ABHD12BQ7Z5M8 362 aaPredicted RBP16.21■□□□□ 0.19
TSSC4-210ENST00000496468 C20orf196Q8IYI0 205 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 LNX2Q8N448 690 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 PACRGLQ8N7B6 248 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 ZNF610Q8N9Z0 462 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 LILRB4Q8NHJ6 448 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 HDAC2Q92769 488 aaKnown RBP16.21■□□□□ 0.19
TSSC4-210ENST00000496468 SLC29A1Q99808 456 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 ALG12Q9BV10 488 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 TEX12Q9BXU0 123 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 ULBP2Q9BZM5 246 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 LINC00470Q9BZP3 86 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 SLC25A19Q9HC21 320 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 SLC7A10Q9NS82 523 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 JKAMPQ9P055 326 aa16.21■□□□□ 0.19
TSSC4-210ENST00000496468 FOXD3Q9UJU5 478 aaPredicted RBP16.21■□□□□ 0.19
TSSC4-210ENST00000496468 H7C1C5 153 aa16.2■□□□□ 0.18
TSSC4-210ENST00000496468 M0R3G1 203 aa16.2■□□□□ 0.18
TSSC4-210ENST00000496468 ARHGEF9O43307 516 aa16.2■□□□□ 0.18
TSSC4-210ENST00000496468 UPK3AO75631 287 aa16.2■□□□□ 0.18
TSSC4-210ENST00000496468 CLDN14O95500 239 aa16.2■□□□□ 0.18
TSSC4-210ENST00000496468 CNOT4O95628 575 aaKnown RBP16.2■□□□□ 0.18
TSSC4-210ENST00000496468 GRK5P34947 590 aa16.2■□□□□ 0.18
TSSC4-210ENST00000496468 LCN6P62502 163 aa16.2■□□□□ 0.18
TSSC4-210ENST00000496468 MYBPC1Q00872 1141 aa16.2■□□□□ 0.18
TSSC4-210ENST00000496468 ITGADQ13349 1161 aa16.2■□□□□ 0.18
TSSC4-210ENST00000496468 GINS1Q14691 196 aa16.2■□□□□ 0.18
TSSC4-210ENST00000496468 CDSNQ15517 529 aa16.2■□□□□ 0.18
TSSC4-210ENST00000496468 Q6ZT83 130 aa16.2■□□□□ 0.18
TSSC4-210ENST00000496468 GALNT4Q8N4A0 578 aa16.2■□□□□ 0.18
TSSC4-210ENST00000496468 SYT14Q8NB59 555 aa16.2■□□□□ 0.18
TSSC4-210ENST00000496468 SDR9C7Q8NEX9 313 aa16.2■□□□□ 0.18
TSSC4-210ENST00000496468 SSC4DQ8WTU2 575 aa16.2■□□□□ 0.18
TSSC4-210ENST00000496468 LRR1Q96L50 414 aa16.2■□□□□ 0.18
TSSC4-210ENST00000496468 KCNK17Q96T54 332 aa16.2■□□□□ 0.18
TSSC4-210ENST00000496468 RBM24Q9BX46 236 aaKnown RBP16.2■□□□□ 0.18
TSSC4-210ENST00000496468 PRRG3Q9BZD7 231 aa16.2■□□□□ 0.18
TSSC4-210ENST00000496468 ASB6Q9NWX5 421 aa16.2■□□□□ 0.18
TSSC4-210ENST00000496468 GLTPQ9NZD2 209 aa16.2■□□□□ 0.18
TSSC4-210ENST00000496468 DIDO1Q9BTC0 2240 aaKnown RBP16.19■□□□□ 0.18
TSSC4-210ENST00000496468 NKX2-6A6NCS4 301 aa16.19■□□□□ 0.18
TSSC4-210ENST00000496468 A8MXE2 369 aa16.19■□□□□ 0.18
TSSC4-210ENST00000496468 IFNGP01579 166 aa16.19■□□□□ 0.18
TSSC4-210ENST00000496468 HIST1H1CP16403 213 aaKnown RBP16.19■□□□□ 0.18
TSSC4-210ENST00000496468 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.19■□□□□ 0.18
TSSC4-210ENST00000496468 SRSF1Q07955 248 aaKnown RBP eCLIP16.19■□□□□ 0.18
TSSC4-210ENST00000496468 FAPQ12884 760 aa16.19■□□□□ 0.18
TSSC4-210ENST00000496468 NPRL3Q12980 569 aa16.19■□□□□ 0.18
TSSC4-210ENST00000496468 PTGES3Q15185 160 aaKnown RBP16.19■□□□□ 0.18
TSSC4-210ENST00000496468 SLC35F1Q5T1Q4 408 aa16.19■□□□□ 0.18
TSSC4-210ENST00000496468 LEG1Q6P5S2 330 aa16.19■□□□□ 0.18
TSSC4-210ENST00000496468 TMEM54Q969K7 222 aa16.19■□□□□ 0.18
TSSC4-210ENST00000496468 LRRC46Q96FV0 321 aa16.19■□□□□ 0.18
TSSC4-210ENST00000496468 RDH12Q96NR8 316 aa16.19■□□□□ 0.18
TSSC4-210ENST00000496468 MRPL13Q9BYD1 178 aaKnown RBP16.19■□□□□ 0.18
TSSC4-210ENST00000496468 VCX3BQ9H321 246 aa16.19■□□□□ 0.18
TSSC4-210ENST00000496468 TOR3AQ9H497 397 aa16.19■□□□□ 0.18
TSSC4-210ENST00000496468 KCNJ16Q9NPI9 418 aa16.19■□□□□ 0.18
TSSC4-210ENST00000496468 GALNT8Q9NY28 637 aa16.19■□□□□ 0.18
TSSC4-210ENST00000496468 SMPD3Q9NY59 655 aaPredicted RBP16.19■□□□□ 0.18
TSSC4-210ENST00000496468 KLHL21Q9UJP4 597 aa16.19■□□□□ 0.18
TSSC4-210ENST00000496468 PRSS37A4D1T9 235 aa16.18■□□□□ 0.18
TSSC4-210ENST00000496468 RIIAD1A6NNX1 92 aa16.18■□□□□ 0.18
TSSC4-210ENST00000496468 ZAR1LA6NP61 321 aa16.18■□□□□ 0.18
TSSC4-210ENST00000496468 RENP00797 406 aa16.18■□□□□ 0.18
TSSC4-210ENST00000496468 RNF224P0DH78 156 aa16.18■□□□□ 0.18
TSSC4-210ENST00000496468 ZNF3P17036 446 aa16.18■□□□□ 0.18
TSSC4-210ENST00000496468 COX5AP20674 150 aa16.18■□□□□ 0.18
TSSC4-210ENST00000496468 EPHA2P29317 976 aa16.18■□□□□ 0.18
TSSC4-210ENST00000496468 GIPRP48546 466 aa16.18■□□□□ 0.18
TSSC4-210ENST00000496468 CDK5Q00535 292 aa16.18■□□□□ 0.18
TSSC4-210ENST00000496468 ROR2Q01974 943 aaKnown RBP16.18■□□□□ 0.18
TSSC4-210ENST00000496468 ZIK1Q3SY52 487 aaPredicted RBP16.18■□□□□ 0.18
TSSC4-210ENST00000496468 PHYHD1Q5SRE7 291 aa16.18■□□□□ 0.18
TSSC4-210ENST00000496468 TMEM236Q5W0B7 351 aa16.18■□□□□ 0.18
TSSC4-210ENST00000496468 ZNF474Q6S9Z5 364 aaPredicted RBP16.18■□□□□ 0.18
TSSC4-210ENST00000496468 PTCHD4Q6ZW05 846 aa16.18■□□□□ 0.18
TSSC4-210ENST00000496468 GABRG1Q8N1C3 465 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms