RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 CHRDL2Q6WN34 429 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 STAC2Q6ZMT1 411 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 ADGRG3Q86Y34 549 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 SIAH3Q8IW03 269 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 CMTM4Q8IZR5 234 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 ZNF676Q8N7Q3 588 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 OTOSQ8NHW6 89 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 STT3BQ8TCJ2 826 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 DUSP19Q8WTR2 217 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 C15orf40Q8WUR7 153 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 RAB40AQ8WXH6 277 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 ASB17Q8WXJ9 295 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 ORAI1Q96D31 301 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 S100A16Q96FQ6 103 aaKnown RBP10.01□□□□□ -0.81
CMSS1-208ENST00000496116 GFI1Q99684 422 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 DUSP23Q9BVJ7 150 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 TXNIPQ9H3M7 391 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 LIN7BQ9HAP6 207 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 ADAMTS20P59510 1910 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 FER1L5A0AVI2 2057 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 TRAV6A0A075B6T7 132 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 ARPC4-TTLL3A0A0A6YYG9 625 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 TRABD2BA6NFA1 517 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 C17orf51A8MQB3 221 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.01□□□□□ -0.81
CMSS1-208ENST00000496116 FAM47E-STBD1D6RA91 191 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 ZNF254O75437 659 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 DXOO77932 396 aaKnown RBP10.01□□□□□ -0.81
CMSS1-208ENST00000496116 ECDO95905 644 aaPredicted RBP10.01□□□□□ -0.81
CMSS1-208ENST00000496116 PNLIPP16233 465 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 DPP4P27487 766 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 SNTB2Q13425 540 aaKnown RBP10.01□□□□□ -0.81
CMSS1-208ENST00000496116 ACKR1Q16570 336 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 FAM199XQ6PEV8 388 aaPredicted RBP10.01□□□□□ -0.81
CMSS1-208ENST00000496116 LRRN1Q6UXK5 716 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 SHISA6Q6ZSJ9 500 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 FCRLAQ7L513 359 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 LINGO2Q7L985 606 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 EID2Q8N6I1 236 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 ZNF248Q8NDW4 579 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 OR2G2Q8NGZ5 317 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 ZNF417Q8TAU3 575 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 GPR148Q8TDV2 347 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 CLDN23Q96B33 292 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 DNAJA3Q96EY1 480 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 DCBLD2Q96PD2 775 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 MED28Q9H204 178 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 GALNT9Q9HCQ5 603 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 STMN3Q9NZ72 180 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 B9D1Q9UPM9 204 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 ETV7Q9Y603 341 aa10.01□□□□□ -0.81
CMSS1-208ENST00000496116 IGLV3-12A0A075B6K2 115 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 A0A0A6YYJ9 748 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 ANXA2P2A6NMY6 339 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 SULT1B1O43704 296 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 IGHMP01871 453 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 ANXA2P07355 339 aaKnown RBP10□□□□□ -0.81
CMSS1-208ENST00000496116 HEXBP07686 556 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 GIFP27352 417 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 GDNFP39905 211 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 MAGEB1P43366 347 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 SOX2P48431 317 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 GZMKP49863 264 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 AP3S2P59780 193 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 MRPS10P82664 201 aaKnown RBP10□□□□□ -0.81
CMSS1-208ENST00000496116 COL28A1Q2UY09 1125 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 COX15Q7KZN9 410 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 CDH24Q86UP0 819 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 CEP76Q8TAP6 659 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 ZNF519Q8TB69 540 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 SCMH1Q96GD3 660 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 GTPBP2Q9BX10 602 aaKnown RBP10□□□□□ -0.81
CMSS1-208ENST00000496116 CACNG6Q9BXT2 260 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 SEMA4CQ9C0C4 833 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 ACTR6Q9GZN1 396 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 VSX1Q9NZR4 365 aaPredicted RBP10□□□□□ -0.81
CMSS1-208ENST00000496116 KLHL9Q9P2J3 617 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 IGHV3-20A0A0C4DH32 117 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 C7orf66A4D0T2 115 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 OR4C45A6NMZ5 311 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 GABARAPH6UMI1 98 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 K7ESF4 209 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 ZNF593O00488 134 aaPredicted RBP10□□□□□ -0.81
CMSS1-208ENST00000496116 SLC16A7O60669 478 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 STOMP27105 288 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 RPS27P42677 84 aaKnown RBP10□□□□□ -0.81
CMSS1-208ENST00000496116 RAG2P55895 527 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 SCAND1P57086 179 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 C17orf67Q0P5P2 114 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 KLF9Q13886 244 aaPredicted RBP10□□□□□ -0.81
CMSS1-208ENST00000496116 MFSD13AQ14CX5 517 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 SLC18B1Q6NT16 456 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 KCTD18Q6PI47 426 aaPredicted RBP10□□□□□ -0.81
CMSS1-208ENST00000496116 PRSS45Q7RTY3 260 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 ANKRD37Q7Z713 158 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 PLCZ1Q86YW0 608 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 IZUMO1Q8IYV9 350 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 GRPEL2Q8TAA5 225 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 NUBPLQ8TB37 319 aa10□□□□□ -0.81
CMSS1-208ENST00000496116 SYNPRQ8TBG9 265 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms