RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 LINC00471Q8N535 108 aa17.05■□□□□ 0.32
HDAC4-212ENST00000495497 CLDN22Q8N7P3 220 aa17.05■□□□□ 0.32
HDAC4-212ENST00000495497 WDR31Q8NA23 367 aa17.05■□□□□ 0.32
HDAC4-212ENST00000495497 OR10G2Q8NGC3 310 aa17.05■□□□□ 0.32
HDAC4-212ENST00000495497 FANK1Q8TC84 345 aa17.05■□□□□ 0.32
HDAC4-212ENST00000495497 HSD17B8Q92506 261 aa17.05■□□□□ 0.32
HDAC4-212ENST00000495497 GTPBP3Q969Y2 492 aaKnown RBP17.05■□□□□ 0.32
HDAC4-212ENST00000495497 OR52D1Q9H346 318 aa17.05■□□□□ 0.32
HDAC4-212ENST00000495497 B3GAT2Q9NPZ5 323 aa17.05■□□□□ 0.32
HDAC4-212ENST00000495497 DNAJB9Q9UBS3 223 aa17.05■□□□□ 0.32
HDAC4-212ENST00000495497 CELSR2Q9HCU4 2923 aa17.05■□□□□ 0.32
HDAC4-212ENST00000495497 ALPK2Q86TB3 2170 aa17.05■□□□□ 0.32
HDAC4-212ENST00000495497 NPIPB13A6NJU9 1138 aa17.04■□□□□ 0.32
HDAC4-212ENST00000495497 DEFB108AA8MXU0 73 aa17.04■□□□□ 0.32
HDAC4-212ENST00000495497 NPIPB4C9JG80 1138 aa17.04■□□□□ 0.32
HDAC4-212ENST00000495497 IGHG1P01857 330 aa17.04■□□□□ 0.32
HDAC4-212ENST00000495497 CD14P08571 375 aa17.04■□□□□ 0.32
HDAC4-212ENST00000495497 QDPRP09417 244 aa17.04■□□□□ 0.32
HDAC4-212ENST00000495497 TGFBR3Q03167 851 aa17.04■□□□□ 0.32
HDAC4-212ENST00000495497 GABPB1Q06547 395 aaPredicted RBP17.04■□□□□ 0.32
HDAC4-212ENST00000495497 PPA1Q15181 289 aa17.04■□□□□ 0.32
HDAC4-212ENST00000495497 TIMM23BQ5SRD1 257 aa17.04■□□□□ 0.32
HDAC4-212ENST00000495497 SMARCD3Q6STE5 483 aa17.04■□□□□ 0.32
HDAC4-212ENST00000495497 NOXO1Q8NFA2 376 aa17.04■□□□□ 0.32
HDAC4-212ENST00000495497 ZNF519Q8TB69 540 aa17.04■□□□□ 0.32
HDAC4-212ENST00000495497 GIPC3Q8TF64 312 aa17.04■□□□□ 0.32
HDAC4-212ENST00000495497 BCL2L2Q92843 193 aaPredicted RBP17.04■□□□□ 0.32
HDAC4-212ENST00000495497 PIK3IP1Q96FE7 263 aa17.04■□□□□ 0.32
HDAC4-212ENST00000495497 DUS3LQ96G46 650 aaKnown RBP17.04■□□□□ 0.32
HDAC4-212ENST00000495497 SAMD8Q96LT4 415 aa17.04■□□□□ 0.32
HDAC4-212ENST00000495497 Q96M85 177 aa17.04■□□□□ 0.32
HDAC4-212ENST00000495497 C1QTNF6Q9BXI9 259 aa17.04■□□□□ 0.32
HDAC4-212ENST00000495497 MRPL13Q9BYD1 178 aaKnown RBP17.04■□□□□ 0.32
HDAC4-212ENST00000495497 NELFAQ9H3P2 528 aa17.04■□□□□ 0.32
HDAC4-212ENST00000495497 EGLN3Q9H6Z9 239 aa17.04■□□□□ 0.32
HDAC4-212ENST00000495497 NTN4Q9HB63 628 aa17.04■□□□□ 0.32
HDAC4-212ENST00000495497 SLC17A5Q9NRA2 495 aa17.04■□□□□ 0.32
HDAC4-212ENST00000495497 PDP1Q9P0J1 537 aaPredicted RBP17.04■□□□□ 0.32
HDAC4-212ENST00000495497 AP4S1Q9Y587 144 aa17.04■□□□□ 0.32
HDAC4-212ENST00000495497 IER3IP1Q9Y5U9 82 aa17.04■□□□□ 0.32
HDAC4-212ENST00000495497 MAGED1Q9Y5V3 778 aaPredicted RBP17.04■□□□□ 0.32
HDAC4-212ENST00000495497 FAM221AA4D161 298 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 H7C1C5 153 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 E2F6O75461 281 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 CTAG2O75638 210 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 IGFBP1P08833 259 aaPredicted RBP17.03■□□□□ 0.32
HDAC4-212ENST00000495497 PRKACGP22612 351 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 SSTR2P30874 369 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 ACTR3P61158 418 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 LCN6P62502 163 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 FMODQ06828 376 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 TAF11Q15544 211 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 HIST3H3Q16695 136 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 RFX4Q33E94 735 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 TBRG1Q3YBR2 411 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 SEZ6L2Q6UXD5 910 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 TMEM200AQ86VY9 491 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 C1orf162Q8NEQ5 155 aaPredicted RBP17.03■□□□□ 0.32
HDAC4-212ENST00000495497 PYDC1Q8WXC3 89 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 LRTOMTQ8WZ04 291 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 MCHR2Q969V1 340 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 RASD2Q96D21 266 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 MUCL1Q96DR8 90 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 FEVQ99581 238 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 NIPSNAP1Q9BPW8 284 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 NRIP3Q9NQ35 241 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 ARMC1Q9NVT9 282 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 NPAP1Q9NZP6 1156 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 POFUT2Q9Y2G5 429 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 SLC25A15Q9Y619 301 aa17.03■□□□□ 0.32
HDAC4-212ENST00000495497 IGKV1D-43A0A0B4J1Z2 117 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 TEX13CA0A0J9YWL9 993 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 ARHGEF9O43307 516 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 SLC2A10O95528 541 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 PPP1R3DO95685 299 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 HRGP04196 525 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 TUBA1BP68363 451 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 TUBA4AP68366 448 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 FBXW10Q5XX13 1052 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 DPY19L2P2Q6ZN68 376 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 ZNF620Q6ZNG0 422 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 TUBA1AQ71U36 451 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 FAM122BQ7Z309 247 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 HDDC2Q7Z4H3 204 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 AMIGO2Q86SJ2 522 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 P2RY8Q86VZ1 359 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 ARIH2OSQ8N7S6 290 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 HTRA1Q92743 480 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 ZNF570Q96NI8 536 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 HS3ST6Q96QI5 342 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 GPX7Q96SL4 187 aaPredicted RBP17.02■□□□□ 0.32
HDAC4-212ENST00000495497 KCNK17Q96T54 332 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 USB1Q9BQ65 265 aaKnown RBP17.02■□□□□ 0.32
HDAC4-212ENST00000495497 DGCR6LQ9BY27 220 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 NDEL1Q9GZM8 345 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 RASSF1Q9NS23 344 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 GRHPRQ9UBQ7 328 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 MGAT4BQ9UQ53 548 aa17.02■□□□□ 0.32
HDAC4-212ENST00000495497 ANKHD1Q8IWZ3 2542 aaKnown RBP17.01■□□□□ 0.31
HDAC4-212ENST00000495497 ZNF99A8MXY4 864 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms