RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 ADAMTS17Q8TE56 1095 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 TMEM176AQ96HP8 235 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 KREMEN1Q96MU8 473 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 SDHCQ99643 169 aaPredicted RBP8.5□□□□□ -1.05
RPSA-209ENST00000495394 ATG10Q9H0Y0 220 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 GSTO2Q9H4Y5 243 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 ZNF395Q9H8N7 513 aaPredicted RBP8.5□□□□□ -1.05
RPSA-209ENST00000495394 SERHLQ9NQF3 203 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 GAR1Q9NY12 217 aaKnown RBP8.5□□□□□ -1.05
RPSA-209ENST00000495394 SCN3BQ9NY72 215 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 CGGBP1Q9UFW8 167 aaPredicted RBP8.5□□□□□ -1.05
RPSA-209ENST00000495394 NME7Q9Y5B8 376 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 EVPLQ92817 2033 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 COL1A2P08123 1366 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 GFRA2O00451 464 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 PLRG1O43660 514 aaKnown RBP8.5□□□□□ -1.05
RPSA-209ENST00000495394 SEMA7AO75326 666 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 RAB40ALP0C0E4 278 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 CHRNB2P17787 502 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 RPS3P23396 243 aaKnown RBP eCLIP8.5□□□□□ -1.05
RPSA-209ENST00000495394 OMGP23515 440 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 NPBWR2P48146 333 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 HTR6P50406 440 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 LCN2P80188 198 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 CAV1Q03135 178 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 MRPL23Q16540 153 aaKnown RBP8.5□□□□□ -1.05
RPSA-209ENST00000495394 TPRG1LQ5T0D9 272 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 WDR25Q64LD2 544 aaPredicted RBP8.5□□□□□ -1.05
RPSA-209ENST00000495394 FAM219AQ8IW50 185 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 CMTM8Q8IZV2 173 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 GPD1LQ8N335 351 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 CDRT4Q8N9R6 151 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 OR4K2Q8NGD2 314 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 LCN9Q8WX39 176 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 ITCHQ96J02 903 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 SMIM8Q96KF7 97 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 RBP7Q96R05 134 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 OR2M2Q96R28 347 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 RAB40CQ96S21 281 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 FTHL17Q9BXU8 183 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 CHRNA10Q9GZZ6 450 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 OR14J1Q9UGF5 321 aa8.5□□□□□ -1.05
RPSA-209ENST00000495394 TANC1Q9C0D5 1861 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 RS1O15537 224 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 SC5DO75845 299 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 CST1P01037 141 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 EGFP01133 1207 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 CYBBP04839 570 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 HOXB5P09067 269 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 SMIM10L2AP0DMW4 78 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 SMIM10L2BP0DMW5 78 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 MTHFD2P13995 350 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 HOXA5P20719 270 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 FGF7P21781 194 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 SLC2A5P22732 501 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 GKP32189 559 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 BCL6P41182 706 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 IL10RAQ13651 578 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 FBLN7Q53RD9 439 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 ZNF770Q6IQ21 691 aaPredicted RBP8.49□□□□□ -1.05
RPSA-209ENST00000495394 BLOC1S3Q6QNY0 202 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 TMPPEQ6ZT21 453 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 RNF44Q7L0R7 432 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 TRMT1LQ7Z2T5 733 aaKnown RBP8.49□□□□□ -1.05
RPSA-209ENST00000495394 ANKRD33Q7Z3H0 272 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 RBM23Q86U06 439 aaKnown RBP8.49□□□□□ -1.05
RPSA-209ENST00000495394 C11orf42Q8N5U0 333 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 CADM4Q8NFZ8 388 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 OR2AP1Q8NGE2 309 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 OR51S1Q8NGJ8 323 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 MRAPQ8TCY5 172 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 TFGQ92734 400 aaPredicted RBP8.49□□□□□ -1.05
RPSA-209ENST00000495394 HOXB13Q92826 284 aaPredicted RBP8.49□□□□□ -1.05
RPSA-209ENST00000495394 SCMH1Q96GD3 660 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 OR52E6Q96RD3 313 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 ZSWIM1Q9BR11 485 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 SSBP4Q9BWG4 385 aaPredicted RBP8.49□□□□□ -1.05
RPSA-209ENST00000495394 FUNDC2Q9BWH2 189 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 ASPNQ9BXN1 380 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 LHPPQ9H008 270 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 PLK3Q9H4B4 646 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.49□□□□□ -1.05
RPSA-209ENST00000495394 HSPB7Q9UBY9 170 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 B3GALT1Q9Y5Z6 326 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 MTCH2Q9Y6C9 303 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 DNAH12Q6ZR08 3092 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 A0A1W2PQF6 199 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 ZNF587BE7ETH6 402 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 RPL10P27635 214 aaKnown RBP8.49□□□□□ -1.05
RPSA-209ENST00000495394 SLC6A4P31645 630 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 CDX1P47902 265 aaPredicted RBP8.49□□□□□ -1.05
RPSA-209ENST00000495394 ASCL1P50553 236 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 KIAA0141Q14154 515 aaPredicted RBP8.49□□□□□ -1.05
RPSA-209ENST00000495394 CLINT1Q14677 625 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 EIF4HQ15056 248 aaKnown RBP8.49□□□□□ -1.05
RPSA-209ENST00000495394 SMN1Q16637 294 aaKnown RBP8.49□□□□□ -1.05
RPSA-209ENST00000495394 LRRC26Q2I0M4 334 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 IDNKQ5T6J7 187 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 STEAP4Q687X5 459 aa8.49□□□□□ -1.05
RPSA-209ENST00000495394 TMEM42Q69YG0 159 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms