RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 TRAV39A0A0B4J263 110 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 A0A0B4J2A0 478 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 IGKV1D-13A0A0B4J2D9 117 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 MGRN1O60291 552 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 FCMRO60667 390 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 IGKV1-13P0DP09 117 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 VHLP40337 213 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 ESRRGP62508 458 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 PLD1Q13393 1074 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 AQP6Q13520 282 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 ZBED5Q49AG3 693 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 COX19Q49B96 90 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 NEGR1Q7Z3B1 354 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 WDR86Q86TI4 376 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 TMEM135Q86UB9 458 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 TRIM69Q86WT6 500 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 VSTM4Q8IW00 320 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 STEAP2Q8NFT2 490 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 OR2T3Q8NH03 318 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 OR5W2Q8NH69 310 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 ESR2Q92731 530 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 SYAP1Q96A49 352 aaPredicted RBP2.14□□□□□ -2.07
ITGB1-216ENST00000493758 PARP12Q9H0J9 701 aaKnown RBP2.14□□□□□ -2.07
ITGB1-216ENST00000493758 ADAP2Q9NPF8 381 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 ZNF355PQ9NSJ1 428 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 ZNRD1Q9P1U0 126 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 SHPKQ9UHJ6 478 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 ZNF222Q9UK12 451 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 TMEM14AQ9Y6G1 99 aa2.14□□□□□ -2.07
ITGB1-216ENST00000493758 CEMIPQ8WUJ3 1361 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 TRAV26-1A0A087WT03 109 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 IGHV5-10-1A0A0J9YXX1 117 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 SRP72O76094 671 aaKnown RBP2.13□□□□□ -2.07
ITGB1-216ENST00000493758 RHOBTB1O94844 696 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 IGHV2-5P01817 119 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 UGT2B15P54855 530 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 RPS21P63220 83 aaKnown RBP2.13□□□□□ -2.07
ITGB1-216ENST00000493758 SYCNQ0VAF6 134 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 ARHGAP19Q14CB8 494 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 PDK3Q15120 406 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 EXOC3L2Q2M3D2 409 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 DNLZQ5SXM8 178 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 FBXW9Q5XUX1 488 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 TRIM40Q6P9F5 258 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 ENPP6Q6UWR7 440 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 SHISA6Q6ZSJ9 500 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 STRADAQ7RTN6 431 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 ZNF461Q8TAF7 563 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 LKAAEAR1Q8TD35 194 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 PHF10Q8WUB8 498 aaKnown RBP2.13□□□□□ -2.07
ITGB1-216ENST00000493758 GEMIN6Q8WXD5 167 aaKnown RBP2.13□□□□□ -2.07
ITGB1-216ENST00000493758 SGK3Q96BR1 496 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 PDXPQ96GD0 296 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 GABARAPL3Q9BY60 117 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 MRPL37Q9BZE1 423 aaKnown RBP2.13□□□□□ -2.07
ITGB1-216ENST00000493758 PTPRTO14522 1441 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 PCM1Q15154 2024 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 TET2Q6N021 2002 aaPredicted RBP2.13□□□□□ -2.07
ITGB1-216ENST00000493758 CDHR2Q9BYE9 1310 aa2.13□□□□□ -2.07
ITGB1-216ENST00000493758 HIVEP2P31629 2446 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 CABIN1Q9Y6J0 2220 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 IGHV3-74A0A0B4J1X5 117 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 ZNF726A6NNF4 738 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 MAGEB3O15480 346 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 ZNF207O43670 478 aaKnown RBP2.12□□□□□ -2.07
ITGB1-216ENST00000493758 VAMP5O95183 116 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 CAPN1P07384 714 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 FOLR1P15328 257 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 NPY1RP25929 384 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 PSMA5P28066 241 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 GDI1P31150 447 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 CYB561P49447 251 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 VAX1Q5SQQ9 334 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 PDZK1Q5T2W1 519 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 PRR9Q5T870 116 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 SLC25A24Q6NUK1 477 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 SLC25A34Q6PIV7 304 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 NTM-AS1Q6ZSK4 140 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 LINC00173Q6ZV60 143 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 MREGQ8N565 214 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 NOXO1Q8NFA2 376 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 OR4S2Q8NH73 311 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 OR10C1Q96KK4 312 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 RBM14Q96PK6 669 aaKnown RBP2.12□□□□□ -2.07
ITGB1-216ENST00000493758 OR8B4Q96RC9 309 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 SORT1Q99523 831 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 ULBP2Q9BZM5 246 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 MFFQ9GZY8 342 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 ISYNA1Q9NPH2 558 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 AP1M2Q9Y6Q5 423 aa2.12□□□□□ -2.07
ITGB1-216ENST00000493758 A0A1W2PP18 115 aa2.11□□□□□ -2.07
ITGB1-216ENST00000493758 C7orf66A4D0T2 115 aa2.11□□□□□ -2.07
ITGB1-216ENST00000493758 RP2O75695 350 aa2.11□□□□□ -2.07
ITGB1-216ENST00000493758 MPZL1O95297 269 aa2.11□□□□□ -2.07
ITGB1-216ENST00000493758 POLR2MP0CAP2 368 aa2.11□□□□□ -2.07
ITGB1-216ENST00000493758 NAMPTP43490 491 aa2.11□□□□□ -2.07
ITGB1-216ENST00000493758 ATP1B3P54709 279 aa2.11□□□□□ -2.07
ITGB1-216ENST00000493758 ERCC8Q13216 396 aa2.11□□□□□ -2.07
ITGB1-216ENST00000493758 PON3Q15166 354 aa2.11□□□□□ -2.07
ITGB1-216ENST00000493758 SF3A2Q15428 464 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms