RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 SLC27A4Q6P1M0 643 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 PACRGLQ8N7B6 248 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 OR6K3Q8NGY3 331 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 OR6N1Q8NGY5 312 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 OR4K13Q8NH42 304 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 TMEM45BQ96B21 275 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 APH1AQ96BI3 265 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 STARD4Q96DR4 205 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 MBOAT4Q96T53 435 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 SFXN3Q9BWM7 321 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 OPN3Q9H1Y3 402 aaPredicted RBP15.22■□□□□ 0.03
LIME1-208ENST00000493265 COQ3Q9NZJ6 369 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 ENOPH1Q9UHY7 261 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 PRSS50Q9UI38 385 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 PROCRQ9UNN8 238 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 XKRYO14609 159 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 IGHMP01871 453 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 ACADSP16219 412 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 SDHAP31040 664 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 OPRM1P35372 400 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 GIPRP48546 466 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 SMSP52788 366 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 MESTQ5EB52 335 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 ARMC4Q5T2S8 1044 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 GPR139Q6DWJ6 353 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 ACSM5Q6NUN0 579 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 MTFR2Q6P444 385 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 FAM122BQ7Z309 247 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 LUZP2Q86TE4 346 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 JAZF1Q86VZ6 243 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 LIX1LQ8IVB5 337 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 ARIH2OSQ8N7S6 290 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 OR52E2Q8NGJ4 325 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 OR6X1Q8NH79 312 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 ZNF519Q8TB69 540 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 ZNF566Q969W8 418 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 ADAD1Q96M93 576 aaKnown RBP15.21■□□□□ 0.03
LIME1-208ENST00000493265 GABARAPL3Q9BY60 117 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 VCX3BQ9H321 246 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 SMPD3Q9NY59 655 aaPredicted RBP15.21■□□□□ 0.03
LIME1-208ENST00000493265 RCE1Q9Y256 329 aa15.21■□□□□ 0.03
LIME1-208ENST00000493265 A6NIZ1 184 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 M0R3G1 203 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 DVL2O14641 736 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 ZG16O60844 167 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 TRMUO75648 421 aaKnown RBP15.2■□□□□ 0.02
LIME1-208ENST00000493265 ZNF432O94892 652 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 SLC2A10O95528 541 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 IGHG1P01857 330 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 HIST1H1CP16403 213 aaKnown RBP15.2■□□□□ 0.02
LIME1-208ENST00000493265 OR3A2P47893 321 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 CSNK1A1P48729 337 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 RAP1BP61224 184 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 RAP1AP62834 184 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 CDK5Q00535 292 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.2■□□□□ 0.02
LIME1-208ENST00000493265 CD47Q08722 323 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 SNCBQ16143 134 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 TSPO2Q5TGU0 170 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 LEG1Q6P5S2 330 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 HDDC2Q7Z4H3 204 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 TMEM123Q8N131 208 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 GPR137CQ8N3F9 429 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 LNX2Q8N448 690 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 ZNF610Q8N9Z0 462 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 SDR9C7Q8NEX9 313 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 CYGBQ8WWM9 190 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 HDAC2Q92769 488 aaKnown RBP15.2■□□□□ 0.02
LIME1-208ENST00000493265 OTULINQ96BN8 352 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 SLC25A44Q96H78 314 aaPredicted RBP15.2■□□□□ 0.02
LIME1-208ENST00000493265 TEX12Q9BXU0 123 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 SLCO5A1Q9H2Y9 848 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 RERGLQ9H628 205 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 C8orf4Q9NR00 106 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 TVP23BQ9NYZ1 205 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 UPB1Q9UBR1 384 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 BAIAP2Q9UQB8 552 aa15.2■□□□□ 0.02
LIME1-208ENST00000493265 NPIPB13A6NJU9 1138 aa15.19■□□□□ 0.02
LIME1-208ENST00000493265 FAM90A27PA6NNH2 459 aa15.19■□□□□ 0.02
LIME1-208ENST00000493265 NPIPB4C9JG80 1138 aa15.19■□□□□ 0.02
LIME1-208ENST00000493265 M0R129 80 aa15.19■□□□□ 0.02
LIME1-208ENST00000493265 IMPA2O14732 288 aa15.19■□□□□ 0.02
LIME1-208ENST00000493265 ARPC3O15145 178 aa15.19■□□□□ 0.02
LIME1-208ENST00000493265 IDH3BO43837 385 aa15.19■□□□□ 0.02
LIME1-208ENST00000493265 UPK3AO75631 287 aa15.19■□□□□ 0.02
LIME1-208ENST00000493265 CHRNB4P30926 498 aa15.19■□□□□ 0.02
LIME1-208ENST00000493265 GRK5P34947 590 aa15.19■□□□□ 0.02
LIME1-208ENST00000493265 DBPQ10586 325 aaPredicted RBP15.19■□□□□ 0.02
LIME1-208ENST00000493265 PHYHD1Q5SRE7 291 aa15.19■□□□□ 0.02
LIME1-208ENST00000493265 C9orf135Q5VTT2 229 aa15.19■□□□□ 0.02
LIME1-208ENST00000493265 FAM205BPQ63HN1 556 aa15.19■□□□□ 0.02
LIME1-208ENST00000493265 TFAP2EQ6VUC0 442 aa15.19■□□□□ 0.02
LIME1-208ENST00000493265 PTCHD4Q6ZW05 846 aa15.19■□□□□ 0.02
LIME1-208ENST00000493265 NOXO1Q8NFA2 376 aa15.19■□□□□ 0.02
LIME1-208ENST00000493265 MARVELD3Q96A59 401 aa15.19■□□□□ 0.02
LIME1-208ENST00000493265 PLEKHA8Q96JA3 519 aa15.19■□□□□ 0.02
LIME1-208ENST00000493265 ALKBH3Q96Q83 286 aaPredicted RBP15.19■□□□□ 0.02
LIME1-208ENST00000493265 NMNAT3Q96T66 252 aa15.19■□□□□ 0.02
LIME1-208ENST00000493265 FN3KQ9H479 309 aa15.19■□□□□ 0.02
LIME1-208ENST00000493265 SLC25A19Q9HC21 320 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms