RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 ACADSP16219 412 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 LOXP28300 417 aaPredicted RBP11.2□□□□□ -0.62
CLIP2-209ENST00000493166 RPL4P36578 427 aaKnown RBP11.2□□□□□ -0.62
CLIP2-209ENST00000493166 LIMS1P48059 325 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 ZNF83P51522 516 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 UBE2NP61088 152 aaKnown RBP11.2□□□□□ -0.62
CLIP2-209ENST00000493166 RPL27P61353 136 aaKnown RBP11.2□□□□□ -0.62
CLIP2-209ENST00000493166 CBX1P83916 185 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 FHL1Q13642 323 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 NCMAPQ5T1S8 102 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 C1QTNF12Q5T7M4 302 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 OR2T5Q6IEZ7 315 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 KLHL17Q6TDP4 642 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 CCDC121Q6ZUS5 278 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 CDH24Q86UP0 819 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 WDR31Q8NA23 367 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 NOXO1Q8NFA2 376 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 OR2T29Q8NH02 315 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 CANT1Q8WVQ1 401 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 NRGNQ92686 78 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 BCL2L2Q92843 193 aaPredicted RBP11.2□□□□□ -0.62
CLIP2-209ENST00000493166 ZNF837Q96EG3 531 aaPredicted RBP11.2□□□□□ -0.62
CLIP2-209ENST00000493166 BOD1Q96IK1 185 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 RSRC1Q96IZ7 334 aaKnown RBP11.2□□□□□ -0.62
CLIP2-209ENST00000493166 KATNB1Q9BVA0 655 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 MMADHCQ9H3L0 296 aaPredicted RBP11.2□□□□□ -0.62
CLIP2-209ENST00000493166 TXNIPQ9H3M7 391 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 PLEKHF2Q9H8W4 249 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 REEP1Q9H902 201 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 OBP2BQ9NPH6 170 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 NPAP1Q9NZP6 1156 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 POFUT2Q9Y2G5 429 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 MAGED1Q9Y5V3 778 aaPredicted RBP11.2□□□□□ -0.62
CLIP2-209ENST00000493166 LYVE1Q9Y5Y7 322 aa11.2□□□□□ -0.62
CLIP2-209ENST00000493166 CADP27708 2225 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 A0A1W2PPR1 153 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 UNC119BA6NIH7 251 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 CENPBD1B2RD01 187 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 M0R1B8 84 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 TRMUO75648 421 aaKnown RBP11.19□□□□□ -0.62
CLIP2-209ENST00000493166 SEC14L2O76054 403 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 NDUFB2O95178 105 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 HOXB6P17509 224 aaKnown RBP11.19□□□□□ -0.62
CLIP2-209ENST00000493166 ERFP50548 548 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 RUNX1T1Q06455 604 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 BSPH1Q075Z2 132 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 ARMC4Q5T2S8 1044 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 FAM205BPQ63HN1 556 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 TMEM108Q6UXF1 575 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 ZNF813Q6ZN06 617 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 ZNF704Q6ZNC4 412 aaPredicted RBP11.19□□□□□ -0.62
CLIP2-209ENST00000493166 ZER1Q7Z7L7 766 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 LINC00471Q8N535 108 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 LRRC75AQ8NAA5 344 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 SYT14Q8NB59 555 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 MAGEE2Q8TD90 523 aaPredicted RBP11.19□□□□□ -0.62
CLIP2-209ENST00000493166 TSPAN32Q96QS1 320 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 CHID1Q9BWS9 393 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 C1QTNF6Q9BXI9 259 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 NELFAQ9H3P2 528 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 UBTD1Q9HAC8 227 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 EDARQ9UNE0 448 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 SIGLEC7Q9Y286 467 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 SAMHD1Q9Y3Z3 626 aaKnown RBP11.19□□□□□ -0.62
CLIP2-209ENST00000493166 RNF115Q9Y4L5 304 aa11.19□□□□□ -0.62
CLIP2-209ENST00000493166 SPG11Q96JI7 2443 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 ARPC4-TTLL3A0A0A6YYG9 625 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 TCRBV3S1A0A5B6 114 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 DPRXA6NFQ7 191 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 A6NIZ1 184 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 EBAG9O00559 213 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 CCNB2O95067 398 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 PLAUP00749 431 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 CST1P01037 141 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 CD14P08571 375 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 QDPRP09417 244 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 NR2C1P13056 603 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 HOXB1P14653 301 aaPredicted RBP11.18□□□□□ -0.62
CLIP2-209ENST00000493166 FPR3P25089 353 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 ACVR1BP36896 505 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 CAPZA2P47755 286 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 HMGA2P52926 109 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 RAP1BP61224 184 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 RAP1AP62834 184 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 ERVK-25P63136 954 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 TUBA1BP68363 451 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 TUBA4AP68366 448 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 MYBPC1Q00872 1141 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 CD47Q08722 323 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 PPP1R8Q12972 351 aaKnown RBP11.18□□□□□ -0.62
CLIP2-209ENST00000493166 SMARCD3Q6STE5 483 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 PAMR1Q6UXH9 720 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 TUBA1AQ71U36 451 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 OR4C15Q8NGM1 316 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 FANK1Q8TC84 345 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 GNPDA2Q8TDQ7 276 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 HDAC2Q92769 488 aaKnown RBP11.18□□□□□ -0.62
CLIP2-209ENST00000493166 GPA33Q99795 319 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 FOXB1Q99853 325 aa11.18□□□□□ -0.62
CLIP2-209ENST00000493166 TMEM204Q9BSN7 226 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms