RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 ARF3P61204 181 aaPredicted RBP11.77□□□□□ -0.53
SHOX2-205ENST00000490689 HAVCR2Q8TDQ0 301 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 PPP1R1CQ8WVI7 109 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 TCTEX1D2Q8WW35 142 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 FAM71F1Q96KD3 344 aaPredicted RBP11.77□□□□□ -0.53
SHOX2-205ENST00000490689 ZNF75AQ96N20 296 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 FAM83CQ9BQN1 747 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 COPS7AQ9UBW8 275 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 MAFFQ9ULX9 164 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 TRAV20A0A0B4J274 112 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 OR2W5A6NFC9 320 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 TTLL8A6PVC2 850 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 PRRT4C9JH25 899 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 APBB3O95704 486 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 PMS2P2O95744 297 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 OPN1LWP04000 364 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 CCR2P41597 374 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 TMEM31Q5JXX7 168 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 CST9Q5W186 159 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 ZNF547Q8IVP9 402 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 ZNF679Q8IYX0 411 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 OR2L8Q8NGY9 312 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 ZNF578Q96N58 590 aaPredicted RBP11.76□□□□□ -0.53
SHOX2-205ENST00000490689 KCNK15Q9H427 330 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 GMEB2Q9UKD1 530 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 B3GALNT1O75752 331 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 PET100P0DJ07 73 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 AVPR2P30518 371 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 SNRPNP63162 240 aaKnown RBP11.76□□□□□ -0.53
SHOX2-205ENST00000490689 CSNK2A1P68400 391 aaPredicted RBP11.76□□□□□ -0.53
SHOX2-205ENST00000490689 MAT1AQ00266 395 aaKnown RBP11.76□□□□□ -0.53
SHOX2-205ENST00000490689 TMEM200AQ86VY9 491 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 GABRG1Q8N1C3 465 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 KDM8Q8N371 416 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 CSNK2A3Q8NEV1 391 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 STK35Q8TDR2 534 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 ST7LQ8TDW4 575 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 SLC41A2Q96JW4 573 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 PITHD1Q9GZP4 211 aaPredicted RBP11.76□□□□□ -0.53
SHOX2-205ENST00000490689 SLC22A13Q9Y226 551 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 SIGLEC7Q9Y286 467 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 EXOGQ9Y2C4 368 aaKnown RBP11.76□□□□□ -0.53
SHOX2-205ENST00000490689 ZNF175Q9Y473 711 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 DSPPQ9NZW4 1301 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 SNRPGP15A8MWD9 76 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 C2orf74A8MZ97 194 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 HOXB2P14652 356 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 CTRB1P17538 263 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 CD80P33681 288 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 DIO1P49895 249 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 CLDN6P56747 220 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 NFATC4Q14934 902 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 DEFB115Q30KQ5 88 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 SLC22A6Q4U2R8 563 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 DMRTC1Q5HYR2 192 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 CTRB2Q6GPI1 263 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 CBLN2Q8IUK8 224 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 OR5H2Q8NGV7 314 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 HHIPL1Q96JK4 782 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 ADAT1Q9BUB4 502 aaKnown RBP11.76□□□□□ -0.53
SHOX2-205ENST00000490689 ADGRL4Q9HBW9 690 aa11.76□□□□□ -0.53
SHOX2-205ENST00000490689 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 PRAMEF27A3QJZ7 478 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 RAB19A4D1S5 217 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 TNFSF12O43508 249 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 SYT7O43581 403 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 SEMA7AO75326 666 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 NDUFB6O95139 128 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 B3GNTL1Q67FW5 361 aaPredicted RBP11.75□□□□□ -0.53
SHOX2-205ENST00000490689 TMEM215Q68D42 235 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 DNM1P34Q6PK57 102 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 C19orf48Q6RUI8 117 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 COMTD1Q86VU5 262 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 MFSD9Q8NBP5 474 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 OR13C9Q8NGT0 318 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 MS4A3Q96HJ5 214 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 TINAGL1Q9GZM7 467 aaPredicted RBP11.75□□□□□ -0.53
SHOX2-205ENST00000490689 OR5V1Q9UGF6 321 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 HHLA2Q9UM44 414 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 PCDHB10Q9UN67 800 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 TRPM6Q9BX84 2022 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 TRAV1-2A0A0B4J238 106 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 TMEM269A0A1B0GVZ9 245 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 RPS10-NUDT3A0A1W2PQS6 291 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 NPIPB8E9PQR5 432 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 OIP5O43482 229 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 FGF17O60258 216 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 PMP2P02689 132 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 OR8U9P0C7N5 309 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 GABRA1P14867 456 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 TUBG1P23258 451 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 RPS10P46783 165 aaKnown RBP11.75□□□□□ -0.53
SHOX2-205ENST00000490689 CYCSP99999 105 aaKnown RBP11.75□□□□□ -0.53
SHOX2-205ENST00000490689 SPIN3Q5JUX0 258 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 ZNF283Q8N7M2 679 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 BVESQ8NE79 360 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 OR4S1Q8NGB4 309 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 OR4K17Q8NGC6 315 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 RNF141Q8WVD5 230 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 MYADMQ96S97 322 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms