RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 MEAF6Q9HAF1 191 aa1.15□□□□□ -2.23
CBWD1-216ENST00000489272 KLHL28Q9NXS3 571 aa1.15□□□□□ -2.23
CBWD1-216ENST00000489272 HOOK1Q9UJC3 728 aaKnown RBP1.15□□□□□ -2.23
CBWD1-216ENST00000489272 A0A1B0GVI7 797 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 TCRBV9S1A1TA0A576 114 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 LRP5LA4QPB2 252 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 A8MXQ7 604 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 UPK3AO75631 287 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 IGHDP01880 384 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 FABP3P05413 133 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 MMP11P24347 488 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 HTR2AP28223 471 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 CXCL12P48061 93 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 SUB1P53999 127 aaKnown RBP eCLIP1.14□□□□□ -2.23
CBWD1-216ENST00000489272 AP1ARQ63HQ0 302 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 RAB12Q6IQ22 244 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 HCP5Q6MZN7 132 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 PRMT9Q6P2P2 845 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 ABHD13Q7L211 337 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 CALHM1Q8IU99 346 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 CCDC50Q8IVM0 306 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 LINC01560Q8TB33 94 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 SGK3Q96BR1 496 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 OXGR1Q96P68 337 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 OSBPL10Q9BXB5 764 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 FRMD8P1Q9BZ68 369 aaPredicted RBP1.14□□□□□ -2.23
CBWD1-216ENST00000489272 NHEJ1Q9H9Q4 299 aaPredicted RBP1.14□□□□□ -2.23
CBWD1-216ENST00000489272 LY9Q9HBG7 655 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 MCCC2Q9HCC0 563 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 DHCR7Q9UBM7 475 aaKnown RBP1.14□□□□□ -2.23
CBWD1-216ENST00000489272 CDH9Q9ULB4 789 aa1.14□□□□□ -2.23
CBWD1-216ENST00000489272 CENPJQ9HC77 1338 aaPredicted RBP1.14□□□□□ -2.23
CBWD1-216ENST00000489272 SCN4AP35499 1836 aa1.13□□□□□ -2.23
CBWD1-216ENST00000489272 IGKV1D-13A0A0B4J2D9 117 aa1.13□□□□□ -2.23
CBWD1-216ENST00000489272 RNF103-CHMP3A0A140T963 221 aa1.13□□□□□ -2.23
CBWD1-216ENST00000489272 RHOBTB1O94844 696 aa1.13□□□□□ -2.23
CBWD1-216ENST00000489272 IGLV6-57P01721 117 aa1.13□□□□□ -2.23
CBWD1-216ENST00000489272 APCSP02743 223 aa1.13□□□□□ -2.23
CBWD1-216ENST00000489272 IGKV1-13P0DP09 117 aa1.13□□□□□ -2.23
CBWD1-216ENST00000489272 TCN1P20061 433 aaPredicted RBP1.13□□□□□ -2.23
CBWD1-216ENST00000489272 RORAP35398 523 aa1.13□□□□□ -2.23
CBWD1-216ENST00000489272 GPR6P46095 362 aaPredicted RBP1.13□□□□□ -2.23
CBWD1-216ENST00000489272 CRISP1P54107 249 aa1.13□□□□□ -2.23
CBWD1-216ENST00000489272 IFT88Q13099 833 aa1.13□□□□□ -2.23
CBWD1-216ENST00000489272 PON3Q15166 354 aa1.13□□□□□ -2.23
CBWD1-216ENST00000489272 SAXO2Q658L1 398 aa1.13□□□□□ -2.23
CBWD1-216ENST00000489272 ZFP1Q6P2D0 407 aa1.13□□□□□ -2.23
CBWD1-216ENST00000489272 MRPL43Q8N983 215 aaKnown RBP1.13□□□□□ -2.23
CBWD1-216ENST00000489272 OR4S2Q8NH73 311 aa1.13□□□□□ -2.23
CBWD1-216ENST00000489272 OR1F12Q8NHA8 337 aa1.13□□□□□ -2.23
CBWD1-216ENST00000489272 COQ8AQ8NI60 647 aa1.13□□□□□ -2.23
CBWD1-216ENST00000489272 KCNK16Q96T55 309 aa1.13□□□□□ -2.23
CBWD1-216ENST00000489272 PARP12Q9H0J9 701 aaKnown RBP1.13□□□□□ -2.23
CBWD1-216ENST00000489272 UBE2ZQ9H832 354 aaPredicted RBP1.13□□□□□ -2.23
CBWD1-216ENST00000489272 FBXO6Q9NRD1 293 aaPredicted RBP1.13□□□□□ -2.23
CBWD1-216ENST00000489272 DDX19AQ9NUU7 478 aaKnown RBP1.13□□□□□ -2.23
CBWD1-216ENST00000489272 PSG8Q9UQ74 426 aa1.13□□□□□ -2.23
CBWD1-216ENST00000489272 SVILO95425 2214 aa1.13□□□□□ -2.23
CBWD1-216ENST00000489272 TM7SF2O76062 418 aa1.12□□□□□ -2.23
CBWD1-216ENST00000489272 CD74P04233 296 aa1.12□□□□□ -2.23
CBWD1-216ENST00000489272 DCKP27707 260 aa1.12□□□□□ -2.23
CBWD1-216ENST00000489272 CCND2P30279 289 aa1.12□□□□□ -2.23
CBWD1-216ENST00000489272 NPBWR2P48146 333 aa1.12□□□□□ -2.23
CBWD1-216ENST00000489272 RPS11P62280 158 aaKnown RBP eCLIP1.12□□□□□ -2.23
CBWD1-216ENST00000489272 DUSP7Q16829 419 aa1.12□□□□□ -2.23
CBWD1-216ENST00000489272 CEMP1Q6PRD7 247 aaPredicted RBP1.12□□□□□ -2.23
CBWD1-216ENST00000489272 Q6ZS52 159 aa1.12□□□□□ -2.23
CBWD1-216ENST00000489272 PEX26Q7Z412 305 aa1.12□□□□□ -2.23
CBWD1-216ENST00000489272 ST20-AS1Q8NBB2 130 aa1.12□□□□□ -2.23
CBWD1-216ENST00000489272 NOXO1Q8NFA2 376 aa1.12□□□□□ -2.23
CBWD1-216ENST00000489272 OR5D13Q8NGL4 314 aa1.12□□□□□ -2.23
CBWD1-216ENST00000489272 OR13G1Q8NGZ3 307 aa1.12□□□□□ -2.23
CBWD1-216ENST00000489272 C15orf40Q8WUR7 153 aa1.12□□□□□ -2.23
CBWD1-216ENST00000489272 MAIP1Q8WWC4 291 aa1.12□□□□□ -2.23
CBWD1-216ENST00000489272 CREB3L1Q96BA8 519 aa1.12□□□□□ -2.23
CBWD1-216ENST00000489272 MRPL38Q96DV4 380 aaKnown RBP1.12□□□□□ -2.23
CBWD1-216ENST00000489272 AMDHD1Q96NU7 426 aa1.12□□□□□ -2.23
CBWD1-216ENST00000489272 FAM111AQ96PZ2 611 aa1.12□□□□□ -2.23
CBWD1-216ENST00000489272 MRPL37Q9BZE1 423 aaKnown RBP1.12□□□□□ -2.23
CBWD1-216ENST00000489272 MOSPD1Q9UJG1 213 aa1.12□□□□□ -2.23
CBWD1-216ENST00000489272 ADAMTS13Q76LX8 1427 aa1.12□□□□□ -2.23
CBWD1-216ENST00000489272 ZSWIM8A7E2V4 1837 aa1.12□□□□□ -2.23
CBWD1-216ENST00000489272 IGHV3OR16-8A0A075B7F1 116 aa1.11□□□□□ -2.23
CBWD1-216ENST00000489272 ZNF98A6NK75 572 aa1.11□□□□□ -2.23
CBWD1-216ENST00000489272 BTN3A3O00478 584 aa1.11□□□□□ -2.23
CBWD1-216ENST00000489272 BPY2O14599 106 aa1.11□□□□□ -2.23
CBWD1-216ENST00000489272 SCGB2A1O75556 95 aa1.11□□□□□ -2.23
CBWD1-216ENST00000489272 YIF1AO95070 293 aa1.11□□□□□ -2.23
CBWD1-216ENST00000489272 PTBP3O95758 552 aaKnown RBP1.11□□□□□ -2.23
CBWD1-216ENST00000489272 HLA-DQA1P01909 254 aa1.11□□□□□ -2.23
CBWD1-216ENST00000489272 ZNF806P0C7X5 589 aa1.11□□□□□ -2.23
CBWD1-216ENST00000489272 ARF4P18085 180 aaPredicted RBP1.11□□□□□ -2.23
CBWD1-216ENST00000489272 CYP2F1P24903 491 aa1.11□□□□□ -2.23
CBWD1-216ENST00000489272 AK4P27144 223 aaPredicted RBP1.11□□□□□ -2.23
CBWD1-216ENST00000489272 RABIFP47224 123 aa1.11□□□□□ -2.23
CBWD1-216ENST00000489272 PRKCDQ05655 676 aa1.11□□□□□ -2.23
CBWD1-216ENST00000489272 PDZK1IP1Q13113 114 aa1.11□□□□□ -2.23
CBWD1-216ENST00000489272 OR5I1Q13606 314 aa1.11□□□□□ -2.23
CBWD1-216ENST00000489272 MESDQ14696 234 aa1.11□□□□□ -2.23
CBWD1-216ENST00000489272 TMEM41BQ5BJD5 291 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms