RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 IGLV3-16A0A075B6K0 115 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 SYNJ2BP-COX16A0A087WUM0 186 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 A0A096LNJ9 63 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 PRSS37A4D1T9 235 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 ZNF726A6NNF4 738 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 H3BNH8 94 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 PEX7O00628 323 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 GOSR2O14653 212 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 PPP1R2P9O14990 202 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 TMEM50AO95807 157 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 IGLV2-23P01705 113 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 FGGP02679 453 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 ZNF32P17041 273 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 VHLP40337 213 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 CXCL5P42830 114 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 CDKN1BP46527 198 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 PPOXP50336 477 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 RORCP51449 518 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 ZNF136P52737 540 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 SUB1P53999 127 aaKnown RBP eCLIP2.03□□□□□ -2.08
CD46-215ENST00000488596 FBXW4P57775 412 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 ACTR3P61158 418 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 LRRC63Q05C16 580 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 ENPEPQ07075 957 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 SMARCB1Q12824 385 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 GGTLC2Q14390 218 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 TSPO2Q5TGU0 170 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 RUFY3Q7L099 469 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 EGFL6Q8IUX8 553 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 OR9K2Q8NGE7 335 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 ACTRT1Q8TDG2 376 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 GEMIN6Q8WXD5 167 aaKnown RBP2.03□□□□□ -2.08
CD46-215ENST00000488596 ASB9Q96DX5 294 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 AURKBQ96GD4 344 aaPredicted RBP2.03□□□□□ -2.08
CD46-215ENST00000488596 GABARAPL3Q9BY60 117 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 ETNK2Q9NVF9 386 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 PISDQ9UG56 409 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 IKZF2Q9UKS7 526 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 NACAE9PAV3 2078 aa2.03□□□□□ -2.08
CD46-215ENST00000488596 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.02□□□□□ -2.09
CD46-215ENST00000488596 PPIAL4EA0A075B759 164 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 PLAC8L1A1L4L8 177 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 KMOO15229 486 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 SNAI2O43623 268 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 ICOSLGO75144 302 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 UPK3AO75631 287 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 CST1P01037 141 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 SERPIND1P05546 499 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 PPIAL4FP0DN26 164 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 IGHV3-43DP0DP04 118 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 SLC2A3P11169 496 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 ZNF30P17039 623 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 PBLDP30039 288 aaPredicted RBP2.02□□□□□ -2.09
CD46-215ENST00000488596 YAP1P46937 504 aaKnown RBP2.02□□□□□ -2.09
CD46-215ENST00000488596 NCBP2P52298 156 aaKnown RBP eCLIP2.02□□□□□ -2.09
CD46-215ENST00000488596 SUCLG1P53597 346 aaKnown RBP2.02□□□□□ -2.09
CD46-215ENST00000488596 PLP1P60201 277 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 KCNJ2P63252 427 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 TGFBIQ15582 683 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 OR52W1Q6IF63 320 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 ZFP2Q6ZN57 461 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 ZNF836Q6ZNA1 936 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 SLC25A48Q6ZT89 311 aaKnown RBP2.02□□□□□ -2.09
CD46-215ENST00000488596 CAMK2N1Q7Z7J9 78 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 NECAB1Q8N987 351 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 AKR7LQ8NHP1 331 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 PLPPR1Q8TBJ4 325 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 ZNF596Q8TC21 504 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 STMN2Q93045 179 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 FAM210BQ96KR6 192 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 TAAR1Q96RJ0 339 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 CTPS2Q9NRF8 586 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 KIAA1257Q9ULG3 409 aa2.02□□□□□ -2.09
CD46-215ENST00000488596 CSDC2Q9Y534 153 aaKnown RBP2.02□□□□□ -2.09
CD46-215ENST00000488596 WDR62O43379 1518 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 XKRYO14609 159 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 DFNA5O60443 496 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 EIF3GO75821 320 aaKnown RBP eCLIP2.01□□□□□ -2.09
CD46-215ENST00000488596 SNX4O95219 450 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 IGKV3-11P04433 115 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 C2P06681 752 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 PLEKP08567 350 aaPredicted RBP2.01□□□□□ -2.09
CD46-215ENST00000488596 UQCRFS1P1P0C7P4 283 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 MCF2P10911 925 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 ADRB3P13945 408 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 FOLR1P15328 257 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 CHMLP26374 656 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 IFNA8P32881 189 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 CRYBB2P43320 205 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 RFX3P48380 749 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 CCR8P51685 355 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 PAX5Q02548 391 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 ZNF92Q03936 586 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 BST2Q10589 180 aaKnown RBP2.01□□□□□ -2.09
CD46-215ENST00000488596 ARHGAP19Q14CB8 494 aa2.01□□□□□ -2.09
CD46-215ENST00000488596 PTGES3Q15185 160 aaKnown RBP2.01□□□□□ -2.09
CD46-215ENST00000488596 COA6Q5JTJ3 125 aaKnown RBP2.01□□□□□ -2.09
CD46-215ENST00000488596 RNASEKQ6P5S7 137 aaKnown RBP2.01□□□□□ -2.09
CD46-215ENST00000488596 NCCRP1Q6ZVX7 275 aaPredicted RBP2.01□□□□□ -2.09
CD46-215ENST00000488596 NIPA1Q7RTP0 329 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms