RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 TXNIPQ9H3M7 391 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 ITGB1BP2Q9UKP3 347 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 MGAT4BQ9UQ53 548 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 PLEKHA6Q9Y2H5 1048 aa13.19□□□□□ -0.3
CXCL12-207ENST00000488591 HRNRQ86YZ3 2850 aaPredicted RBP13.18□□□□□ -0.3
CXCL12-207ENST00000488591 TRAV27A0A087WT01 109 aa13.18□□□□□ -0.3
CXCL12-207ENST00000488591 ARPC4-TTLL3A0A0A6YYG9 625 aa13.18□□□□□ -0.3
CXCL12-207ENST00000488591 TRBV4-1A0A0J9YWV2 114 aa13.18□□□□□ -0.3
CXCL12-207ENST00000488591 SH3PXD2BA1X283 911 aa13.18□□□□□ -0.3
CXCL12-207ENST00000488591 ACOT8O14734 319 aa13.18□□□□□ -0.3
CXCL12-207ENST00000488591 ENTPD5O75356 428 aa13.18□□□□□ -0.3
CXCL12-207ENST00000488591 NR2C1P13056 603 aa13.18□□□□□ -0.3
CXCL12-207ENST00000488591 ACADSP16219 412 aa13.18□□□□□ -0.3
CXCL12-207ENST00000488591 HOXB6P17509 224 aaKnown RBP13.18□□□□□ -0.3
CXCL12-207ENST00000488591 RPL4P36578 427 aaKnown RBP13.18□□□□□ -0.3
CXCL12-207ENST00000488591 CTXN1P60606 82 aa13.18□□□□□ -0.3
CXCL12-207ENST00000488591 PGM2L1Q6PCE3 622 aa13.18□□□□□ -0.3
CXCL12-207ENST00000488591 C20orf204Q6ZNR8 217 aa13.18□□□□□ -0.3
CXCL12-207ENST00000488591 OR13C2Q8NGS9 318 aa13.18□□□□□ -0.3
CXCL12-207ENST00000488591 ASB10Q8WXI3 467 aa13.18□□□□□ -0.3
CXCL12-207ENST00000488591 ZNF837Q96EG3 531 aaPredicted RBP13.18□□□□□ -0.3
CXCL12-207ENST00000488591 NPAP1Q9NZP6 1156 aa13.18□□□□□ -0.3
CXCL12-207ENST00000488591 SPG11Q96JI7 2443 aa13.18□□□□□ -0.3
CXCL12-207ENST00000488591 AQP12BA6NM10 295 aa13.17□□□□□ -0.3
CXCL12-207ENST00000488591 CDC42EP2O14613 210 aa13.17□□□□□ -0.3
CXCL12-207ENST00000488591 ABCD4O14678 606 aa13.17□□□□□ -0.3
CXCL12-207ENST00000488591 OR10H3O60404 316 aa13.17□□□□□ -0.3
CXCL12-207ENST00000488591 PLAUP00749 431 aa13.17□□□□□ -0.3
CXCL12-207ENST00000488591 QDPRP09417 244 aa13.17□□□□□ -0.3
CXCL12-207ENST00000488591 PGA4P0DJD7 388 aa13.17□□□□□ -0.3
CXCL12-207ENST00000488591 PGA3P0DJD8 388 aa13.17□□□□□ -0.3
CXCL12-207ENST00000488591 CD40P25942 277 aa13.17□□□□□ -0.3
CXCL12-207ENST00000488591 MAGEA2P43356 314 aa13.17□□□□□ -0.3
CXCL12-207ENST00000488591 CAPZA2P47755 286 aa13.17□□□□□ -0.3
CXCL12-207ENST00000488591 OMPP47874 163 aa13.17□□□□□ -0.3
CXCL12-207ENST00000488591 IST1P53990 364 aa13.17□□□□□ -0.3
CXCL12-207ENST00000488591 RPL27P61353 136 aaKnown RBP13.17□□□□□ -0.3
CXCL12-207ENST00000488591 TOP3AQ13472 1001 aaPredicted RBP13.17□□□□□ -0.3
CXCL12-207ENST00000488591 SEC23BQ15437 767 aa13.17□□□□□ -0.3
CXCL12-207ENST00000488591 ARMC4Q5T2S8 1044 aa13.17□□□□□ -0.3
CXCL12-207ENST00000488591 FAM205BPQ63HN1 556 aa13.17□□□□□ -0.3
CXCL12-207ENST00000488591 ADAM5Q6NVV9 412 aa13.17□□□□□ -0.3
CXCL12-207ENST00000488591 ZNF813Q6ZN06 617 aa13.17□□□□□ -0.3
CXCL12-207ENST00000488591 WDFY1Q8IWB7 410 aa13.17□□□□□ -0.3
CXCL12-207ENST00000488591 AQP12AQ8IXF9 295 aa13.17□□□□□ -0.3
CXCL12-207ENST00000488591 LINC00471Q8N535 108 aa13.17□□□□□ -0.3
CXCL12-207ENST00000488591 AKAP1Q92667 903 aaKnown RBP eCLIP13.17□□□□□ -0.3
CXCL12-207ENST00000488591 FOXB1Q99853 325 aa13.17□□□□□ -0.3
CXCL12-207ENST00000488591 FUZQ9BT04 418 aa13.17□□□□□ -0.3
CXCL12-207ENST00000488591 ZNF346Q9UL40 294 aaKnown RBP13.17□□□□□ -0.3
CXCL12-207ENST00000488591 PRR14LQ5THK1 2151 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 CREBBPQ92793 2442 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 UNC119BA6NIH7 251 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 A6NIZ1 184 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 TNFRSF11BO00300 401 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 HS3ST1O14792 307 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 GSC2O15499 205 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 DHHO43323 396 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 PTP4A3O75365 173 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 TRMUO75648 421 aaKnown RBP13.16□□□□□ -0.3
CXCL12-207ENST00000488591 NDUFB2O95178 105 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 ATE1O95260 518 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 IGHMP01871 453 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 RAP2AP10114 183 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 ACVR1BP36896 505 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 LIMS1P48059 325 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 ZNF84P51523 738 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 HMGA2P52926 109 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 RAP1BP61224 184 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 RAP1AP62834 184 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 FLOT2Q14254 428 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 SLC22A25Q6T423 547 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 ZNF627Q7L945 461 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 IGFN1Q86VF2 1251 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 LRRC75AQ8NAA5 344 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 SYT14Q8NB59 555 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 NOXO1Q8NFA2 376 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 FNDC8Q8TC99 324 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 NANOS1Q8WY41 292 aaKnown RBP13.16□□□□□ -0.3
CXCL12-207ENST00000488591 PIGTQ969N2 578 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 MCHR2Q969V1 340 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 RSRC1Q96IZ7 334 aaKnown RBP13.16□□□□□ -0.3
CXCL12-207ENST00000488591 RBP7Q96R05 134 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 KCNS3Q9BQ31 491 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 MRPL13Q9BYD1 178 aaKnown RBP13.16□□□□□ -0.3
CXCL12-207ENST00000488591 CCM2LQ9NUG4 571 aaPredicted RBP13.16□□□□□ -0.3
CXCL12-207ENST00000488591 GRHPRQ9UBQ7 328 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 POU2F3Q9UKI9 436 aa13.16□□□□□ -0.3
CXCL12-207ENST00000488591 ALPK2Q86TB3 2170 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 SEC14L2O76054 403 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 FARS2O95363 451 aaKnown RBP13.15□□□□□ -0.3
CXCL12-207ENST00000488591 CD14P08571 375 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 B4GALT1P15291 398 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 ARR3P36575 388 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 ERVK-25P63136 954 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 RUNX1T1Q06455 604 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 CD47Q08722 323 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 FHL1Q13642 323 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 HIST3H3Q16695 136 aa13.15□□□□□ -0.3
CXCL12-207ENST00000488591 C3orf36Q3SXR2 165 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms