RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 EXD2Q9NVH0 621 aa1.29□□□□□ -2.2
SMC4-219ENST00000487747 GIN1Q9NXP7 522 aa1.29□□□□□ -2.2
SMC4-219ENST00000487747 CDH9Q9ULB4 789 aa1.29□□□□□ -2.2
SMC4-219ENST00000487747 PACSIN2Q9UNF0 486 aaPredicted RBP1.29□□□□□ -2.2
SMC4-219ENST00000487747 U3KQV3 271 aa1.29□□□□□ -2.2
SMC4-219ENST00000487747 SVILO95425 2214 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 IGHV3-74A0A0B4J1X5 117 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 KRT87PA6NCN2 255 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 RGS16O15492 202 aaPredicted RBP1.28□□□□□ -2.2
SMC4-219ENST00000487747 CLDN3O15551 220 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 BCAS1O75363 584 aaPredicted RBP1.28□□□□□ -2.2
SMC4-219ENST00000487747 RP2O75695 350 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 TM7SF2O76062 418 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 RHOBTB1O94844 696 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 C1GALT1C1LP0DN25 315 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 TNNI3P19429 210 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 CYP2F1P24903 491 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 ATP6V1E1P36543 226 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 CSNK1A1P48729 337 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 CASP4P49662 377 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 CDH4P55283 916 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 GMFBP60983 142 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 SCGB2A2Q13296 93 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 PLD1Q13393 1074 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 PON3Q15166 354 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 HCP5Q6MZN7 132 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 DNAJC24Q6P3W2 148 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 CNSTQ6PJW8 725 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 FADS6Q8N9I5 356 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 CIRBP-AS1Q8TBR5 109 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 SH3YL1Q96HL8 342 aaPredicted RBP1.28□□□□□ -2.2
SMC4-219ENST00000487747 CCT7Q99832 543 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 ZSCAN5AQ9BUG6 496 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 GBA3Q9H227 469 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 MFHAS1Q9Y4C4 1052 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 ADAMTS13Q76LX8 1427 aa1.28□□□□□ -2.2
SMC4-219ENST00000487747 COL5A3P25940 1745 aaPredicted RBP1.27□□□□□ -2.21
SMC4-219ENST00000487747 SF3B1O75533 1304 aaKnown RBP eCLIP1.27□□□□□ -2.217e-33■■■■■ 320.9
SMC4-219ENST00000487747 FANCIQ9NVI1 1328 aa1.27□□□□□ -2.21
SMC4-219ENST00000487747 A0A087WZY1 265 aa1.27□□□□□ -2.21
SMC4-219ENST00000487747 J3QRE1 110 aa1.27□□□□□ -2.21
SMC4-219ENST00000487747 BTN3A3O00478 584 aa1.27□□□□□ -2.21
SMC4-219ENST00000487747 SCGB2A1O75556 95 aa1.27□□□□□ -2.21
SMC4-219ENST00000487747 OXSR1O95747 527 aaPredicted RBP1.27□□□□□ -2.21
SMC4-219ENST00000487747 GAPDHP04406 335 aaKnown RBP1.27□□□□□ -2.21
SMC4-219ENST00000487747 ZNF806P0C7X5 589 aa1.27□□□□□ -2.21
SMC4-219ENST00000487747 MAPK3P27361 379 aaPredicted RBP1.27□□□□□ -2.21
SMC4-219ENST00000487747 PRRX1P54821 245 aa1.27□□□□□ -2.21
SMC4-219ENST00000487747 FLI1Q01543 452 aaPredicted RBP1.27□□□□□ -2.21
SMC4-219ENST00000487747 PIGHQ14442 188 aaPredicted RBP1.27□□□□□ -2.21
SMC4-219ENST00000487747 GINS1Q14691 196 aa1.27□□□□□ -2.21
SMC4-219ENST00000487747 PHYHD1Q5SRE7 291 aa1.27□□□□□ -2.21
SMC4-219ENST00000487747 ISLR2Q6UXK2 745 aa1.27□□□□□ -2.21
SMC4-219ENST00000487747 Q6ZS52 159 aa1.27□□□□□ -2.21
SMC4-219ENST00000487747 CCDC65Q8IXS2 484 aa1.27□□□□□ -2.21
SMC4-219ENST00000487747 SLC38A6Q8IZM9 456 aa1.27□□□□□ -2.21
SMC4-219ENST00000487747 IPMKQ8NFU5 416 aa1.27□□□□□ -2.21
SMC4-219ENST00000487747 LINC01560Q8TB33 94 aa1.27□□□□□ -2.21
SMC4-219ENST00000487747 SPRYD4Q8WW59 207 aaPredicted RBP1.27□□□□□ -2.21
SMC4-219ENST00000487747 SGK3Q96BR1 496 aa1.27□□□□□ -2.21
SMC4-219ENST00000487747 C4orf36Q96KX1 117 aa1.27□□□□□ -2.21
SMC4-219ENST00000487747 AMDHD1Q96NU7 426 aa1.27□□□□□ -2.21
SMC4-219ENST00000487747 SECISBP2Q96T21 854 aaKnown RBP1.27□□□□□ -2.21
SMC4-219ENST00000487747 KRT23Q9C075 422 aa1.27□□□□□ -2.21
SMC4-219ENST00000487747 DHX35Q9H5Z1 703 aaKnown RBP1.27□□□□□ -2.21
SMC4-219ENST00000487747 SYNDIG1Q9H7V2 258 aa1.27□□□□□ -2.21
SMC4-219ENST00000487747 CACNA1DQ01668 2161 aa1.27□□□□□ -2.21
SMC4-219ENST00000487747 TCRBV9S1A1TA0A576 114 aa1.26□□□□□ -2.21
SMC4-219ENST00000487747 GCM2O75603 506 aaPredicted RBP1.26□□□□□ -2.21
SMC4-219ENST00000487747 CRISP1P54107 249 aa1.26□□□□□ -2.21
SMC4-219ENST00000487747 INAQ16352 499 aa1.26□□□□□ -2.21
SMC4-219ENST00000487747 SMUG1Q53HV7 270 aa1.26□□□□□ -2.21
SMC4-219ENST00000487747 ZFP1Q6P2D0 407 aa1.26□□□□□ -2.21
SMC4-219ENST00000487747 SLC35F2Q8IXU6 374 aa1.26□□□□□ -2.21
SMC4-219ENST00000487747 FAM9BQ8IZU0 186 aa1.26□□□□□ -2.21
SMC4-219ENST00000487747 CENPLQ8N0S6 344 aaPredicted RBP1.26□□□□□ -2.21
SMC4-219ENST00000487747 TMEM104Q8NE00 496 aa1.26□□□□□ -2.21
SMC4-219ENST00000487747 C1orf64Q8NEQ6 169 aa1.26□□□□□ -2.21
SMC4-219ENST00000487747 OSTF1Q92882 214 aa1.26□□□□□ -2.21
SMC4-219ENST00000487747 UFD1Q92890 307 aa1.26□□□□□ -2.21
SMC4-219ENST00000487747 CAMK2N2Q96S95 79 aa1.26□□□□□ -2.21
SMC4-219ENST00000487747 UBE2ZQ9H832 354 aaPredicted RBP1.26□□□□□ -2.21
SMC4-219ENST00000487747 FBXO6Q9NRD1 293 aaPredicted RBP1.26□□□□□ -2.21
SMC4-219ENST00000487747 ACTR3BQ9P1U1 418 aa1.26□□□□□ -2.21
SMC4-219ENST00000487747 HOOK1Q9UJC3 728 aaKnown RBP1.26□□□□□ -2.21
SMC4-219ENST00000487747 CHMP2BQ9UQN3 213 aa1.26□□□□□ -2.21
SMC4-219ENST00000487747 TICRRQ7Z2Z1 1910 aa1.26□□□□□ -2.21
SMC4-219ENST00000487747 CENPJQ9HC77 1338 aaPredicted RBP1.25□□□□□ -2.21
SMC4-219ENST00000487747 MRPS12O15235 138 aaKnown RBP1.25□□□□□ -2.21
SMC4-219ENST00000487747 MFN2O95140 757 aa1.25□□□□□ -2.21
SMC4-219ENST00000487747 AK1P00568 194 aa1.25□□□□□ -2.21
SMC4-219ENST00000487747 APCSP02743 223 aa1.25□□□□□ -2.21
SMC4-219ENST00000487747 FABP3P05413 133 aa1.25□□□□□ -2.21
SMC4-219ENST00000487747 CALCBP10092 127 aa1.25□□□□□ -2.21
SMC4-219ENST00000487747 NPBWR2P48146 333 aa1.25□□□□□ -2.21
SMC4-219ENST00000487747 GDI2P50395 445 aaKnown RBP1.25□□□□□ -2.21
SMC4-219ENST00000487747 CCR8P51685 355 aa1.25□□□□□ -2.21
SMC4-219ENST00000487747 CRYBB1P53674 252 aaPredicted RBP1.25□□□□□ -2.21
SMC4-219ENST00000487747 C1orf61Q13536 156 aa1.25□□□□□ -2.21
SMC4-219ENST00000487747 DUSP7Q16829 419 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms