RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 SAMSN1Q9NSI8 373 aaKnown RBP2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 XCL2Q9UBD3 114 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 CLCF1Q9UBD9 225 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 TRAPPC4Q9Y296 219 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 CDHR2Q9BYE9 1310 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 SMCO3A2RU48 225 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 FAM47DPA6NHR8 397 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 KRTAP4-16G5E9R7 235 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 TMX2-CTNND1H3BSU7 103 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 PANO1I0J062 215 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 MOSP00540 346 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 CNR1P21554 472 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 HOXA9P31269 272 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 TFPI2P48307 235 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 CCR8P51685 355 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 YWHAGP61981 247 aaKnown RBP eCLIP2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 ACTA1P68133 377 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 MRPS22P82650 360 aaKnown RBP2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 HMGCS1Q01581 520 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 CLINT1Q14677 625 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 ZNF77Q15935 545 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 SGCAQ16586 387 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 MAJINQ3KP22 176 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 VPS26BQ4G0F5 336 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 UQCC3Q6UW78 93 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 IGFL2Q6UWQ7 119 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 TMEM107Q6UX40 140 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 ZNF621Q6ZSS3 439 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 ABHD13Q7L211 337 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 OAFQ86UD1 273 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 EID2Q8N6I1 236 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 OR4F6Q8NGB9 312 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 OR1L6Q8NGR2 347 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 KCNG3Q8TAE7 436 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 MARCH1Q8TCQ1 289 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 SLC2A14Q8TDB8 520 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 CD300LFQ8TDQ1 290 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 CXorf40AQ8TE69 158 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 NT5C3BQ969T7 300 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 DNAJC19Q96DA6 116 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 MED8Q96G25 268 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 TSNARE1Q96NA8 513 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 TSSK3Q96PN8 268 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 TAAR1Q96RJ0 339 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 VCXQ9H320 206 aa2.45□□□□□ -2.02
HMGB1P36-201ENST00000487709 IGLV4-69A0A075B6H9 119 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 TRAV39A0A0B4J263 110 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 CDC7O00311 574 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 PPP1R2P9O14990 202 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 DFNA5O60443 496 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 SUPT3HO75486 399 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 EIF3GO75821 320 aaKnown RBP eCLIP2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 IGHV2-5P01817 119 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 BGLAPP02818 100 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 IGHV3-43DP0DP04 118 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 FOXN2P32314 431 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 NPBWR2P48146 333 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 CYB561P49447 251 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 ZNF92Q03936 586 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 ECH1Q13011 328 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 AQP6Q13520 282 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 PSG5Q15238 335 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 UBE2SQ16763 222 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 TMEM183BQ1AE95 376 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 TTLL9Q3SXZ7 439 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 TMEM255AQ5JRV8 349 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 PP632Q6XCG6 107 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 TMEM183AQ8IXX5 376 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 PUSL1Q8N0Z8 303 aaKnown RBP2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 ZADH2Q8N4Q0 377 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 ZNF433Q8N7K0 673 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 OR56B2PQ8NGI1 322 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 AKR7LQ8NHP1 331 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 ACTRT1Q8TDG2 376 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 IL22RA2Q969J5 263 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 SGK3Q96BR1 496 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 PIK3IP1Q96FE7 263 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 AURKBQ96GD4 344 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 RNF185Q96GF1 192 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 TCHPQ9BT92 498 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 ANP32EQ9BTT0 268 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 PARP12Q9H0J9 701 aaKnown RBP2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 LINC00597Q9H2U6 94 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 ZFP14Q9HCL3 533 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 DMAP1Q9NPF5 467 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 SLC7A8Q9UHI5 535 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 CD84Q9UIB8 345 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 RABL2BQ9UNT1 228 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 ASB3Q9Y575 518 aa2.44□□□□□ -2.02
HMGB1P36-201ENST00000487709 MAP3K15Q6ZN16 1313 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 FRMPD3Q5JV73 1810 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 HEATR9A2RTY3 570 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 SLC25A14O95258 325 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 ZNF24P17028 368 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 KITLGP21583 273 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 RRM2P31350 389 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 SERPINB5P36952 375 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 CXCL5P42830 114 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 LHX2P50458 406 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms