RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 FZD2Q14332 565 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 RFX4Q33E94 735 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 LCN12Q6JVE5 192 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 ZNF530Q6P9A1 599 aaPredicted RBP2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 PP632Q6XCG6 107 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 CAMK2N1Q7Z7J9 78 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 LHFPL3Q86UP9 236 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 THOC6Q86W42 341 aaKnown RBP2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 MKXQ8IYA7 352 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 OTUD6BQ8N6M0 293 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 Q8N9W7 124 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 CCDC54Q8NEL0 328 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 OR2G3Q8NGZ4 309 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 PLPPR1Q8TBJ4 325 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 RAB3IL1Q8TBN0 382 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 MCOLN3Q8TDD5 553 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 GPR151Q8TDV0 419 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 PIBF1Q8WXW3 757 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 RARRES2Q99969 163 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 ECSITQ9BQ95 431 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 NUP58Q9BVL2 599 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 ILKAPQ9H0C8 392 aaPredicted RBP2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 CLMPQ9H6B4 373 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 SLC25A37Q9NYZ2 338 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 PACSIN2Q9UNF0 486 aaPredicted RBP2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 NEU3Q9UQ49 428 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 TRAPPC4Q9Y296 219 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 TP53TG5Q9Y2B4 290 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 TDRD6O60522 2096 aaKnown RBP2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 ZBED9Q6R2W3 1325 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 PRDM2Q13029 1718 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 MSH6P52701 1360 aa2.33□□□□□ -2.04
SNRNP27-204ENST00000487029 UNC13AQ9UPW8 1703 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 CTAGE15A4D2H0 777 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 H0YHG0 523 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 PEX7O00628 323 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 DLGAP1O14490 977 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 HMMRO75330 724 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 TPM3P06753 285 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 PNMA6AP0CW24 399 aaPredicted RBP2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 ZNF43P17038 809 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 MDKP21741 143 aaPredicted RBP2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 FGF8P55075 233 aaPredicted RBP2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 PRMT2P55345 433 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 GPX6P59796 221 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 REG3AQ06141 175 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 IDI1Q13907 227 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 PSG5Q15238 335 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 SGCAQ16586 387 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 VPS26BQ4G0F5 336 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 ZNF658BQ4V348 819 aaPredicted RBP2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 XKR7Q5GH72 579 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 COA6Q5JTJ3 125 aaKnown RBP2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 ARMC12Q5T9G4 340 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 CYB5R2Q6BCY4 276 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 CCDC73Q6ZRK6 1079 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 ZNF621Q6ZSS3 439 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 PEX26Q7Z412 305 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 TMEM135Q86UB9 458 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 CTAGE6Q86UF2 777 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 ZNF429Q86V71 674 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 B3GNT7Q8NFL0 401 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 SLC22A8Q8TCC7 542 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 DTX3LQ8TDB6 740 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 SDR42E1Q8WUS8 393 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 SGK3Q96BR1 496 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 MED8Q96G25 268 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 ZNF799Q96GE5 643 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 FAM210BQ96KR6 192 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 GPR61Q9BZJ8 451 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 ZNF331Q9NQX6 463 aaPredicted RBP2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 INPP5EQ9NRR6 644 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 DCAF16Q9NXF7 216 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 ZNF226Q9NYT6 803 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 GNPTGQ9UJJ9 305 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 HEBP2Q9Y5Z4 205 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 CCDC144AA2RUR9 1427 aa2.32□□□□□ -2.04
SNRNP27-204ENST00000487029 RLFQ13129 1914 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 IGKV1D-13A0A0B4J2D9 117 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 FAM166BA8MTA8 275 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 H3BNH8 94 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 XKRYO14609 159 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 ERLIN1O75477 346 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 CA11O75493 328 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 EIF3GO75821 320 aaKnown RBP eCLIP2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 IGHV3-43DP0DP04 118 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 IGKV1-13P0DP09 117 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 PSG2P11465 335 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 RPS10P46783 165 aaKnown RBP2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 LHX2P50458 406 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 CCR8P51685 355 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 ACLYP53396 1101 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 ZNF92Q03936 586 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 AQP6Q13520 282 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 ZBED5Q49AG3 693 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 HSP90B2PQ58FF3 399 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 Q6ZVH6 145 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 H2AFVQ71UI9 128 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 NIPA1Q7RTP0 329 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms