RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 VRK1Q99986 396 aaPredicted RBP15.34■□□□□ 0.05
COL6A1-204ENST00000486023 RHNO1Q9BSD3 238 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 FNDC11Q9BVV2 318 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 GRIP2Q9C0E4 1043 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 ADA2Q9NZK5 511 aa15.34■□□□□ 0.05
COL6A1-204ENST00000486023 GMNCA6NCL1 334 aa15.33■□□□□ 0.04
COL6A1-204ENST00000486023 QDPRP09417 244 aa15.33■□□□□ 0.04
COL6A1-204ENST00000486023 IFI30P13284 250 aa15.33■□□□□ 0.04
COL6A1-204ENST00000486023 HOXB4P17483 251 aaPredicted RBP15.33■□□□□ 0.04
COL6A1-204ENST00000486023 DRD4P21917 467 aa15.33■□□□□ 0.04
COL6A1-204ENST00000486023 FUT4P22083 530 aa15.33■□□□□ 0.04
COL6A1-204ENST00000486023 PAX7P23759 505 aa15.33■□□□□ 0.04
COL6A1-204ENST00000486023 LSP1P33241 339 aa15.33■□□□□ 0.04
COL6A1-204ENST00000486023 GNGT1P63211 74 aa15.33■□□□□ 0.04
COL6A1-204ENST00000486023 LSM11P83369 360 aaKnown RBP eCLIP15.33■□□□□ 0.04
COL6A1-204ENST00000486023 GSG1Q2KHT4 349 aa15.33■□□□□ 0.04
COL6A1-204ENST00000486023 KRT80Q6KB66 452 aa15.33■□□□□ 0.04
COL6A1-204ENST00000486023 CCDC36Q8IYA8 594 aa15.33■□□□□ 0.04
COL6A1-204ENST00000486023 RNF148Q8N7C7 305 aa15.33■□□□□ 0.04
COL6A1-204ENST00000486023 MOSPD2Q8NHP6 518 aa15.33■□□□□ 0.04
COL6A1-204ENST00000486023 TMEM54Q969K7 222 aa15.33■□□□□ 0.04
COL6A1-204ENST00000486023 SLC25A44Q96H78 314 aaPredicted RBP15.33■□□□□ 0.04
COL6A1-204ENST00000486023 POM121Q96HA1 1249 aa15.33■□□□□ 0.04
COL6A1-204ENST00000486023 MS4A3Q96HJ5 214 aa15.33■□□□□ 0.04
COL6A1-204ENST00000486023 POLR2J2Q9GZM3 115 aaKnown RBP15.33■□□□□ 0.04
COL6A1-204ENST00000486023 POLR2J3Q9H1A7 115 aaKnown RBP15.33■□□□□ 0.04
COL6A1-204ENST00000486023 NOX3Q9HBY0 568 aa15.33■□□□□ 0.04
COL6A1-204ENST00000486023 CRNNQ9UBG3 495 aaPredicted RBP15.33■□□□□ 0.04
COL6A1-204ENST00000486023 EGFL7Q9UHF1 273 aa15.33■□□□□ 0.04
COL6A1-204ENST00000486023 A4GNTQ9UNA3 340 aa15.33■□□□□ 0.04
COL6A1-204ENST00000486023 SH3PXD2BA1X283 911 aa15.32■□□□□ 0.04
COL6A1-204ENST00000486023 RAB36O95755 333 aa15.32■□□□□ 0.04
COL6A1-204ENST00000486023 IGKV3-15P01624 115 aa15.32■□□□□ 0.04
COL6A1-204ENST00000486023 IGLV1-44P01699 117 aa15.32■□□□□ 0.04
COL6A1-204ENST00000486023 THBS4P35443 961 aa15.32■□□□□ 0.04
COL6A1-204ENST00000486023 GIPRP48546 466 aa15.32■□□□□ 0.04
COL6A1-204ENST00000486023 SNRPD2P62316 118 aaKnown RBP15.32■□□□□ 0.04
COL6A1-204ENST00000486023 RAB1AP62820 205 aa15.32■□□□□ 0.04
COL6A1-204ENST00000486023 HGFACQ04756 655 aa15.32■□□□□ 0.04
COL6A1-204ENST00000486023 RUNX1T1Q06455 604 aa15.32■□□□□ 0.04
COL6A1-204ENST00000486023 CARTPTQ16568 116 aa15.32■□□□□ 0.04
COL6A1-204ENST00000486023 IFI44LQ53G44 452 aa15.32■□□□□ 0.04
COL6A1-204ENST00000486023 LRFN4Q6PJG9 635 aa15.32■□□□□ 0.04
COL6A1-204ENST00000486023 CLEC2AQ6UVW9 174 aa15.32■□□□□ 0.04
COL6A1-204ENST00000486023 SKA3Q8IX90 412 aa15.32■□□□□ 0.04
COL6A1-204ENST00000486023 ZNF525Q8N782 197 aa15.32■□□□□ 0.04
COL6A1-204ENST00000486023 OR4F15Q8NGB8 312 aa15.32■□□□□ 0.04
COL6A1-204ENST00000486023 NANOS1Q8WY41 292 aaKnown RBP15.32■□□□□ 0.04
COL6A1-204ENST00000486023 HSH2DQ96JZ2 352 aa15.32■□□□□ 0.04
COL6A1-204ENST00000486023 PRRC1Q96M27 445 aa15.32■□□□□ 0.04
COL6A1-204ENST00000486023 ZNF347Q96SE7 839 aa15.32■□□□□ 0.04
COL6A1-204ENST00000486023 SH3GL3Q99963 347 aa15.32■□□□□ 0.04
COL6A1-204ENST00000486023 MYLK2Q9H1R3 596 aa15.32■□□□□ 0.04
COL6A1-204ENST00000486023 MOV10Q9HCE1 1003 aaKnown RBP15.32■□□□□ 0.04
COL6A1-204ENST00000486023 INIPQ9NRY2 104 aa15.32■□□□□ 0.04
COL6A1-204ENST00000486023 IGHV4-30-2A0A087WSY4 118 aa15.31■□□□□ 0.04
COL6A1-204ENST00000486023 IGHV2OR16-5A0A0B4J2B6 119 aa15.31■□□□□ 0.04
COL6A1-204ENST00000486023 VSTM5A8MXK1 200 aa15.31■□□□□ 0.04
COL6A1-204ENST00000486023 SNX3O60493 162 aa15.31■□□□□ 0.04
COL6A1-204ENST00000486023 IGHG1P01857 330 aa15.31■□□□□ 0.04
COL6A1-204ENST00000486023 SAGP10523 405 aaPredicted RBP15.31■□□□□ 0.04
COL6A1-204ENST00000486023 THRBP10828 461 aa15.31■□□□□ 0.04
COL6A1-204ENST00000486023 TOP3AQ13472 1001 aaPredicted RBP15.31■□□□□ 0.04
COL6A1-204ENST00000486023 DAG1Q14118 895 aa15.31■□□□□ 0.04
COL6A1-204ENST00000486023 MST1LQ2TV78 715 aa15.31■□□□□ 0.04
COL6A1-204ENST00000486023 CBLL1Q75N03 491 aa15.31■□□□□ 0.04
COL6A1-204ENST00000486023 FAM169BQ8N8A8 192 aa15.31■□□□□ 0.04
COL6A1-204ENST00000486023 RBM15BQ8NDT2 890 aaKnown RBP15.31■□□□□ 0.04
COL6A1-204ENST00000486023 OR51A7Q8NH64 312 aa15.31■□□□□ 0.04
COL6A1-204ENST00000486023 BPIFA2Q96DR5 249 aa15.31■□□□□ 0.04
COL6A1-204ENST00000486023 RNF121Q9H920 327 aa15.31■□□□□ 0.04
COL6A1-204ENST00000486023 B3GNT2Q9NY97 397 aa15.31■□□□□ 0.04
COL6A1-204ENST00000486023 ZANQ9Y493 2812 aa15.31■□□□□ 0.04
COL6A1-204ENST00000486023 DHHO43323 396 aa15.3■□□□□ 0.04
COL6A1-204ENST00000486023 GMNNO75496 209 aa15.3■□□□□ 0.04
COL6A1-204ENST00000486023 TP53P04637 393 aaPredicted RBP15.3■□□□□ 0.04
COL6A1-204ENST00000486023 PGA4P0DJD7 388 aa15.3■□□□□ 0.04
COL6A1-204ENST00000486023 PGA3P0DJD8 388 aa15.3■□□□□ 0.04
COL6A1-204ENST00000486023 TCN1P20061 433 aaPredicted RBP15.3■□□□□ 0.04
COL6A1-204ENST00000486023 PPP2R2BQ00005 443 aa15.3■□□□□ 0.04
COL6A1-204ENST00000486023 SNTB2Q13425 540 aaKnown RBP15.3■□□□□ 0.04
COL6A1-204ENST00000486023 RAB39AQ14964 217 aa15.3■□□□□ 0.04
COL6A1-204ENST00000486023 TRAM2Q15035 370 aa15.3■□□□□ 0.04
COL6A1-204ENST00000486023 ADIPOQQ15848 244 aa15.3■□□□□ 0.04
COL6A1-204ENST00000486023 SWI5Q1ZZU3 235 aa15.3■□□□□ 0.04
COL6A1-204ENST00000486023 C3orf36Q3SXR2 165 aa15.3■□□□□ 0.04
COL6A1-204ENST00000486023 C8orf82Q6P1X6 216 aaPredicted RBP15.3■□□□□ 0.04
COL6A1-204ENST00000486023 TBPL2Q6SJ96 375 aa15.3■□□□□ 0.04
COL6A1-204ENST00000486023 HACD2Q6Y1H2 254 aa15.3■□□□□ 0.04
COL6A1-204ENST00000486023 ALPK2Q86TB3 2170 aa15.3■□□□□ 0.04
COL6A1-204ENST00000486023 IGFN1Q86VF2 1251 aa15.3■□□□□ 0.04
COL6A1-204ENST00000486023 NRMQ8IXM6 262 aa15.3■□□□□ 0.04
COL6A1-204ENST00000486023 SLC22A24Q8N4F4 322 aa15.3■□□□□ 0.04
COL6A1-204ENST00000486023 ANKS4BQ8N8V4 417 aa15.3■□□□□ 0.04
COL6A1-204ENST00000486023 GEMIN6Q8WXD5 167 aaKnown RBP15.3■□□□□ 0.04
COL6A1-204ENST00000486023 MCHR2Q969V1 340 aa15.3■□□□□ 0.04
COL6A1-204ENST00000486023 HEATR1Q9H583 2144 aaKnown RBP15.3■□□□□ 0.04
COL6A1-204ENST00000486023 B9A039 149 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 INAFM1C9JVW0 142 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 H7C417 338 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms