RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 ADAD1Q96M93 576 aaKnown RBP10.68□□□□□ -0.7
MSH5-216ENST00000484309 HS6ST2Q96MM7 605 aa10.68□□□□□ -0.7
MSH5-216ENST00000484309 FOXB1Q99853 325 aa10.68□□□□□ -0.7
MSH5-216ENST00000484309 BDH2Q9BUT1 245 aa10.68□□□□□ -0.7
MSH5-216ENST00000484309 SPAG4Q9NPE6 437 aa10.68□□□□□ -0.7
MSH5-216ENST00000484309 CBLN4Q9NTU7 201 aa10.68□□□□□ -0.7
MSH5-216ENST00000484309 GLTPQ9NZD2 209 aa10.68□□□□□ -0.7
MSH5-216ENST00000484309 CRNNQ9UBG3 495 aaPredicted RBP10.68□□□□□ -0.7
MSH5-216ENST00000484309 ARL2BPQ9Y2Y0 163 aa10.68□□□□□ -0.7
MSH5-216ENST00000484309 YLPM1P49750 1951 aaKnown RBP10.68□□□□□ -0.7
MSH5-216ENST00000484309 RTTNQ86VV8 2226 aa10.68□□□□□ -0.7
MSH5-216ENST00000484309 ZANQ9Y493 2812 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 CSPG4Q6UVK1 2322 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 A0A1W2PRG6 482 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 NDUFAB1O14561 156 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 SSX4O60224 188 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 IGKV3-15P01624 115 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 IGLV1-44P01699 117 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 CRYAAP02489 173 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 PATE4P0C8F1 98 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 PGA4P0DJD7 388 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 PGA3P0DJD8 388 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 HOXB1P14653 301 aaPredicted RBP10.67□□□□□ -0.7
MSH5-216ENST00000484309 CBR1P16152 277 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 MAKP20794 623 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 IFNA8P32881 189 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 MSX2P35548 267 aaPredicted RBP10.67□□□□□ -0.7
MSH5-216ENST00000484309 CLRN1P58418 232 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 TNK1Q13470 666 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 TOP3AQ13472 1001 aaPredicted RBP10.67□□□□□ -0.7
MSH5-216ENST00000484309 LAPTM4AQ15012 233 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 TRAM2Q15035 370 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 GLYATQ6IB77 296 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 ZNF544Q6NX49 715 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 TBPL2Q6SJ96 375 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 TSEN54Q7Z6J9 526 aaKnown RBP10.67□□□□□ -0.7
MSH5-216ENST00000484309 BIVMQ86UB2 503 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 IGFN1Q86VF2 1251 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 FAM86B1Q8N7N1 296 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 SYT14Q8NB59 555 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 MAPK1IP1LQ8NDC0 245 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 ASB10Q8WXI3 467 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 BPIFA2Q96DR5 249 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 SLC25A44Q96H78 314 aaPredicted RBP10.67□□□□□ -0.7
MSH5-216ENST00000484309 MS4A3Q96HJ5 214 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 ZNF347Q96SE7 839 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 KATNB1Q9BVA0 655 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 INIPQ9NRY2 104 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 ZNF224Q9NZL3 707 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 TAGLN3Q9UI15 199 aa10.67□□□□□ -0.7
MSH5-216ENST00000484309 NSD1Q96L73 2696 aaPredicted RBP10.66□□□□□ -0.7
MSH5-216ENST00000484309 NF1P21359 2839 aa10.66□□□□□ -0.7
MSH5-216ENST00000484309 TRAV27A0A087WT01 109 aa10.66□□□□□ -0.7
MSH5-216ENST00000484309 hCG_2039718K7EN88 272 aa10.66□□□□□ -0.7
MSH5-216ENST00000484309 DCTN3O75935 186 aa10.66□□□□□ -0.7
MSH5-216ENST00000484309 DIRAS1O95057 198 aa10.66□□□□□ -0.7
MSH5-216ENST00000484309 LY6G6DO95868 133 aa10.66□□□□□ -0.7
MSH5-216ENST00000484309 IGHG1P01857 330 aa10.66□□□□□ -0.7
MSH5-216ENST00000484309 QDPRP09417 244 aa10.66□□□□□ -0.7
MSH5-216ENST00000484309 SAGP10523 405 aaPredicted RBP10.66□□□□□ -0.7
MSH5-216ENST00000484309 APOBEC3AP31941 199 aaPredicted RBP10.66□□□□□ -0.7
MSH5-216ENST00000484309 ARR3P36575 388 aa10.66□□□□□ -0.7
MSH5-216ENST00000484309 GPR4P46093 362 aa10.66□□□□□ -0.7
MSH5-216ENST00000484309 PTDSS1P48651 473 aaKnown RBP10.66□□□□□ -0.7
MSH5-216ENST00000484309 RIPPLY3P57055 190 aa10.66□□□□□ -0.7
MSH5-216ENST00000484309 MXRA7P84157 204 aa10.66□□□□□ -0.7
MSH5-216ENST00000484309 GSG1Q2KHT4 349 aa10.66□□□□□ -0.7
MSH5-216ENST00000484309 C1QTNF12Q5T7M4 302 aa10.66□□□□□ -0.7
MSH5-216ENST00000484309 LRFN4Q6PJG9 635 aa10.66□□□□□ -0.7
MSH5-216ENST00000484309 CLEC9AQ6UXN8 241 aa10.66□□□□□ -0.7
MSH5-216ENST00000484309 NOXO1Q8NFA2 376 aa10.66□□□□□ -0.7
MSH5-216ENST00000484309 FGFBP3Q8TAT2 258 aa10.66□□□□□ -0.7
MSH5-216ENST00000484309 LRRC37BQ96QE4 947 aa10.66□□□□□ -0.7
MSH5-216ENST00000484309 B3GNT2Q9NY97 397 aa10.66□□□□□ -0.7
MSH5-216ENST00000484309 RPS6KA6Q9UK32 745 aa10.66□□□□□ -0.7
MSH5-216ENST00000484309 ZFHX3Q15911 3703 aa10.66□□□□□ -0.7
MSH5-216ENST00000484309 A0A087WUU8 490 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 IGHV2OR16-5A0A0B4J2B6 119 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 RNF223E7ERA6 249 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 DYNC1I1O14576 645 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 DHHO43323 396 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 TRMUO75648 421 aaKnown RBP10.65□□□□□ -0.7
MSH5-216ENST00000484309 LY6HO94772 140 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 PRSS23O95084 383 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 SLC2A10O95528 541 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 IGF2P01344 180 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 ACADSP16219 412 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 GIPRP48546 466 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 NUDT6P53370 316 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 HGFACQ04756 655 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 FMODQ06828 376 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 ALG10Q5BKT4 473 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 KRT80Q6KB66 452 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 ZNF730Q6ZMV8 503 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 SKA3Q8IX90 412 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 PGAM4Q8N0Y7 254 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 OR13C2Q8NGS9 318 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 OR51A7Q8NH64 312 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 LIPHQ8WWY8 451 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 NANOS1Q8WY41 292 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms