RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 ESRP2Q9H6T0 727 aaKnown RBP23.19■■□□□ 1.3
GTF3C4-202ENST00000483873 UBTD1Q9HAC8 227 aa23.19■■□□□ 1.3
GTF3C4-202ENST00000483873 AURKCQ9UQB9 309 aa23.19■■□□□ 1.3
GTF3C4-202ENST00000483873 TMEM5Q9Y2B1 443 aa23.19■■□□□ 1.3
GTF3C4-202ENST00000483873 AMDHD2Q9Y303 409 aa23.19■■□□□ 1.3
GTF3C4-202ENST00000483873 SH3PXD2BA1X283 911 aa23.18■■□□□ 1.3
GTF3C4-202ENST00000483873 MCIDASD6RGH6 385 aa23.18■■□□□ 1.3
GTF3C4-202ENST00000483873 PGA4P0DJD7 388 aa23.18■■□□□ 1.3
GTF3C4-202ENST00000483873 PGA3P0DJD8 388 aa23.18■■□□□ 1.3
GTF3C4-202ENST00000483873 MAGEA2P43356 314 aa23.18■■□□□ 1.3
GTF3C4-202ENST00000483873 OMPP47874 163 aa23.18■■□□□ 1.3
GTF3C4-202ENST00000483873 LIMS1P48059 325 aa23.18■■□□□ 1.3
GTF3C4-202ENST00000483873 SH3BGRP55822 239 aaPredicted RBP23.18■■□□□ 1.3
GTF3C4-202ENST00000483873 TUBA1BP68363 451 aa23.18■■□□□ 1.3
GTF3C4-202ENST00000483873 TUBA4AP68366 448 aa23.18■■□□□ 1.3
GTF3C4-202ENST00000483873 ANKRD16Q6P6B7 361 aa23.18■■□□□ 1.3
GTF3C4-202ENST00000483873 TUBA1AQ71U36 451 aa23.18■■□□□ 1.3
GTF3C4-202ENST00000483873 LRRC75AQ8NAA5 344 aa23.18■■□□□ 1.3
GTF3C4-202ENST00000483873 ZNF566Q969W8 418 aa23.18■■□□□ 1.3
GTF3C4-202ENST00000483873 ZNF347Q96SE7 839 aa23.18■■□□□ 1.3
GTF3C4-202ENST00000483873 B3GAT2Q9NPZ5 323 aa23.18■■□□□ 1.3
GTF3C4-202ENST00000483873 RAP2AP10114 183 aa23.17■■□□□ 1.3
GTF3C4-202ENST00000483873 SLC9A3P48764 834 aa23.17■■□□□ 1.3
GTF3C4-202ENST00000483873 TOP3AQ13472 1001 aaPredicted RBP23.17■■□□□ 1.3
GTF3C4-202ENST00000483873 KPNB1Q14974 876 aaKnown RBP23.17■■□□□ 1.3
GTF3C4-202ENST00000483873 KLHL24Q6TFL4 600 aa23.17■■□□□ 1.3
GTF3C4-202ENST00000483873 SSX8Q7RTT4 187 aa23.17■■□□□ 1.3
GTF3C4-202ENST00000483873 RSRC1Q96IZ7 334 aaKnown RBP23.17■■□□□ 1.3
GTF3C4-202ENST00000483873 GLTPQ9NZD2 209 aa23.17■■□□□ 1.3
GTF3C4-202ENST00000483873 RNF115Q9Y4L5 304 aa23.17■■□□□ 1.3
GTF3C4-202ENST00000483873 OTOGQ6ZRI0 2925 aa23.17■■□□□ 1.3
GTF3C4-202ENST00000483873 HEATR1Q9H583 2144 aaKnown RBP23.17■■□□□ 1.3
GTF3C4-202ENST00000483873 CCDC168Q8NDH2 2452 aa23.17■■□□□ 1.3
GTF3C4-202ENST00000483873 ZNF99A8MXY4 864 aaPredicted RBP23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 M0R1B8 84 aa23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 CD3EP07766 207 aa23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 ZNF26P17031 533 aaPredicted RBP23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 DAP3P51398 398 aaKnown RBP23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 SMIM11AP58511 58 aa23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 CTXN1P60606 82 aa23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 PRPS1P60891 318 aa23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 ARMC4Q5T2S8 1044 aa23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 ADAM5Q6NVV9 412 aa23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 KBTBD8Q8NFY9 601 aa23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 SLCO4A1Q96BD0 722 aa23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 ALPK1Q96QP1 1244 aa23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 GPA33Q99795 319 aa23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 CCM2LQ9NUG4 571 aaPredicted RBP23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 ITGB1BP2Q9UKP3 347 aa23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 DSCAMO60469 2012 aa23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 TRMUO75648 421 aaKnown RBP23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 IGHG1P01857 330 aa23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 IST1P53990 364 aa23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 ACTR3P61158 418 aa23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 SPOCK1Q08629 439 aa23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 ZBED5Q49AG3 693 aa23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 SYT14Q8NB59 555 aa23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 NOXO1Q8NFA2 376 aa23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 LILRB1Q8NHL6 650 aaPredicted RBP23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 MAGEE2Q8TD90 523 aaPredicted RBP23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 NEUROG1Q92886 237 aa23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 TXNIPQ9H3M7 391 aa23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 DENND2DQ9H6A0 471 aaPredicted RBP23.16■■□□□ 1.3
GTF3C4-202ENST00000483873 NPIPB13A6NJU9 1138 aa23.15■■□□□ 1.3
GTF3C4-202ENST00000483873 NPIPB4C9JG80 1138 aa23.15■■□□□ 1.3
GTF3C4-202ENST00000483873 ACADSP16219 412 aa23.15■■□□□ 1.3
GTF3C4-202ENST00000483873 CLRN1P58418 232 aa23.15■■□□□ 1.3
GTF3C4-202ENST00000483873 UBE2NP61088 152 aaKnown RBP23.15■■□□□ 1.3
GTF3C4-202ENST00000483873 MYBPC1Q00872 1141 aa23.15■■□□□ 1.3
GTF3C4-202ENST00000483873 LRFN4Q6PJG9 635 aa23.15■■□□□ 1.3
GTF3C4-202ENST00000483873 HDAC2Q92769 488 aaKnown RBP23.15■■□□□ 1.3
GTF3C4-202ENST00000483873 CHID1Q9BWS9 393 aa23.15■■□□□ 1.3
GTF3C4-202ENST00000483873 MRPL13Q9BYD1 178 aaKnown RBP23.15■■□□□ 1.3
GTF3C4-202ENST00000483873 ZNF346Q9UL40 294 aaKnown RBP23.15■■□□□ 1.3
GTF3C4-202ENST00000483873 SIGLEC7Q9Y286 467 aa23.15■■□□□ 1.3
GTF3C4-202ENST00000483873 POFUT2Q9Y2G5 429 aa23.15■■□□□ 1.3
GTF3C4-202ENST00000483873 ARPC4-TTLL3A0A0A6YYG9 625 aa23.14■■□□□ 1.29
GTF3C4-202ENST00000483873 ZNF503-AS2A6NEH8 195 aa23.14■■□□□ 1.29
GTF3C4-202ENST00000483873 ABCD4O14678 606 aa23.14■■□□□ 1.29
GTF3C4-202ENST00000483873 ATE1O95260 518 aa23.14■■□□□ 1.29
GTF3C4-202ENST00000483873 WNT11O96014 354 aa23.14■■□□□ 1.29
GTF3C4-202ENST00000483873 IGHMP01871 453 aa23.14■■□□□ 1.29
GTF3C4-202ENST00000483873 RAF1P04049 648 aa23.14■■□□□ 1.29
GTF3C4-202ENST00000483873 PPP1R8Q12972 351 aaKnown RBP23.14■■□□□ 1.29
GTF3C4-202ENST00000483873 ANKDD1AQ495B1 522 aa23.14■■□□□ 1.29
GTF3C4-202ENST00000483873 KLHL17Q6TDP4 642 aa23.14■■□□□ 1.29
GTF3C4-202ENST00000483873 ZER1Q7Z7L7 766 aa23.14■■□□□ 1.29
GTF3C4-202ENST00000483873 AKAP1Q92667 903 aaKnown RBP eCLIP23.14■■□□□ 1.29
GTF3C4-202ENST00000483873 TSPAN32Q96QS1 320 aa23.14■■□□□ 1.29
GTF3C4-202ENST00000483873 OBP2BQ9NPH6 170 aa23.14■■□□□ 1.29
GTF3C4-202ENST00000483873 VNN3Q9NY84 501 aa23.14■■□□□ 1.29
GTF3C4-202ENST00000483873 LYVE1Q9Y5Y7 322 aa23.14■■□□□ 1.29
GTF3C4-202ENST00000483873 FKBP6O75344 327 aa23.13■■□□□ 1.29
GTF3C4-202ENST00000483873 QDPRP09417 244 aa23.13■■□□□ 1.29
GTF3C4-202ENST00000483873 B4GALT1P15291 398 aa23.13■■□□□ 1.29
GTF3C4-202ENST00000483873 CD40P25942 277 aa23.13■■□□□ 1.29
GTF3C4-202ENST00000483873 RPL27P61353 136 aaKnown RBP23.13■■□□□ 1.29
GTF3C4-202ENST00000483873 HIST3H3Q16695 136 aa23.13■■□□□ 1.29
GTF3C4-202ENST00000483873 TMEM108Q6UXF1 575 aa23.13■■□□□ 1.29
GTF3C4-202ENST00000483873 ZNF813Q6ZN06 617 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms