RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 TMEM5Q9Y2B1 443 aa15.72■□□□□ 0.11
HDAC6-225ENST00000483506 V9GYQ6 96 aa15.72■□□□□ 0.11
HDAC6-225ENST00000483506 VPS13CQ709C8 3753 aa15.72■□□□□ 0.11
HDAC6-225ENST00000483506 A0A096LPE4 126 aa15.71■□□□□ 0.11
HDAC6-225ENST00000483506 A0A1W2PPZ6 126 aa15.71■□□□□ 0.11
HDAC6-225ENST00000483506 TCRBV5S2A0A599 114 aa15.71■□□□□ 0.11
HDAC6-225ENST00000483506 EFCAB9A8MZ26 197 aa15.71■□□□□ 0.11
HDAC6-225ENST00000483506 M0R1B8 84 aa15.71■□□□□ 0.11
HDAC6-225ENST00000483506 UBOX5O94941 541 aa15.71■□□□□ 0.11
HDAC6-225ENST00000483506 IGKV3-15P01624 115 aa15.71■□□□□ 0.11
HDAC6-225ENST00000483506 IGLV1-44P01699 117 aa15.71■□□□□ 0.11
HDAC6-225ENST00000483506 IGHG1P01857 330 aa15.71■□□□□ 0.11
HDAC6-225ENST00000483506 FABP3P05413 133 aa15.71■□□□□ 0.11
HDAC6-225ENST00000483506 SAGP10523 405 aaPredicted RBP15.71■□□□□ 0.11
HDAC6-225ENST00000483506 PAX1P15863 534 aa15.71■□□□□ 0.11
HDAC6-225ENST00000483506 LIMS1P48059 325 aa15.71■□□□□ 0.11
HDAC6-225ENST00000483506 ZNF133P52736 654 aaPredicted RBP15.71■□□□□ 0.11
HDAC6-225ENST00000483506 UBE2NP61088 152 aaKnown RBP15.71■□□□□ 0.11
HDAC6-225ENST00000483506 LAPTM4AQ15012 233 aa15.71■□□□□ 0.11
HDAC6-225ENST00000483506 ALG10Q5BKT4 473 aa15.71■□□□□ 0.11
HDAC6-225ENST00000483506 LRFN4Q6PJG9 635 aa15.71■□□□□ 0.11
HDAC6-225ENST00000483506 PIWIL3Q7Z3Z3 882 aaKnown RBP15.71■□□□□ 0.11
HDAC6-225ENST00000483506 LRRC75A-AS1Q8N1F1 130 aa15.71■□□□□ 0.11
HDAC6-225ENST00000483506 NEUROG1Q92886 237 aa15.71■□□□□ 0.11
HDAC6-225ENST00000483506 POP5Q969H6 163 aaKnown RBP15.71■□□□□ 0.11
HDAC6-225ENST00000483506 FBXW5Q969U6 566 aa15.71■□□□□ 0.11
HDAC6-225ENST00000483506 MCUR1Q96AQ8 359 aa15.71■□□□□ 0.11
HDAC6-225ENST00000483506 TXNIPQ9H3M7 391 aa15.71■□□□□ 0.11
HDAC6-225ENST00000483506 ARID1AO14497 2285 aa15.7■□□□□ 0.1
HDAC6-225ENST00000483506 HEATR1Q9H583 2144 aaKnown RBP15.7■□□□□ 0.1
HDAC6-225ENST00000483506 TRBV4-1A0A0J9YWV2 114 aa15.7■□□□□ 0.1
HDAC6-225ENST00000483506 CDC42EP2O14613 210 aa15.7■□□□□ 0.1
HDAC6-225ENST00000483506 DIRAS1O95057 198 aa15.7■□□□□ 0.1
HDAC6-225ENST00000483506 DANCRP0C864 163 aa15.7■□□□□ 0.1
HDAC6-225ENST00000483506 MAGEA2P43356 314 aa15.7■□□□□ 0.1
HDAC6-225ENST00000483506 OMPP47874 163 aa15.7■□□□□ 0.1
HDAC6-225ENST00000483506 CDH11P55287 796 aa15.7■□□□□ 0.1
HDAC6-225ENST00000483506 SMIM11AP58511 58 aa15.7■□□□□ 0.1
HDAC6-225ENST00000483506 RUNX1T1Q06455 604 aa15.7■□□□□ 0.1
HDAC6-225ENST00000483506 SPOCK1Q08629 439 aa15.7■□□□□ 0.1
HDAC6-225ENST00000483506 SEC23BQ15437 767 aa15.7■□□□□ 0.1
HDAC6-225ENST00000483506 RRM2BQ7LG56 351 aa15.7■□□□□ 0.1
HDAC6-225ENST00000483506 OAFQ86UD1 273 aa15.7■□□□□ 0.1
HDAC6-225ENST00000483506 LURAP1LQ8IV03 231 aa15.7■□□□□ 0.1
HDAC6-225ENST00000483506 CDK20Q8IZL9 346 aa15.7■□□□□ 0.1
HDAC6-225ENST00000483506 NOXO1Q8NFA2 376 aa15.7■□□□□ 0.1
HDAC6-225ENST00000483506 ASB9Q96DX5 294 aa15.7■□□□□ 0.1
HDAC6-225ENST00000483506 SLC38A2Q96QD8 506 aa15.7■□□□□ 0.1
HDAC6-225ENST00000483506 ZNF347Q96SE7 839 aa15.7■□□□□ 0.1
HDAC6-225ENST00000483506 FOXB1Q99853 325 aa15.7■□□□□ 0.1
HDAC6-225ENST00000483506 C1QTNF6Q9BXI9 259 aa15.7■□□□□ 0.1
HDAC6-225ENST00000483506 ZNF469Q96JG9 3925 aaPredicted RBP15.69■□□□□ 0.1
HDAC6-225ENST00000483506 TRAV27A0A087WT01 109 aa15.69■□□□□ 0.1
HDAC6-225ENST00000483506 IGHV1-18A0A0C4DH31 117 aa15.69■□□□□ 0.1
HDAC6-225ENST00000483506 ZNF503-AS2A6NEH8 195 aa15.69■□□□□ 0.1
HDAC6-225ENST00000483506 MCIDASD6RGH6 385 aa15.69■□□□□ 0.1
HDAC6-225ENST00000483506 TRMUO75648 421 aaKnown RBP15.69■□□□□ 0.1
HDAC6-225ENST00000483506 PDE5AO76074 875 aa15.69■□□□□ 0.1
HDAC6-225ENST00000483506 CBR1P16152 277 aa15.69■□□□□ 0.1
HDAC6-225ENST00000483506 ACADSP16219 412 aa15.69■□□□□ 0.1
HDAC6-225ENST00000483506 GPR4P46093 362 aa15.69■□□□□ 0.1
HDAC6-225ENST00000483506 MS4A2Q01362 244 aa15.69■□□□□ 0.1
HDAC6-225ENST00000483506 NRN1LQ496H8 165 aa15.69■□□□□ 0.1
HDAC6-225ENST00000483506 FGD3Q5JSP0 725 aa15.69■□□□□ 0.1
HDAC6-225ENST00000483506 FAM205BPQ63HN1 556 aa15.69■□□□□ 0.1
HDAC6-225ENST00000483506 CYP2R1Q6VVX0 501 aa15.69■□□□□ 0.1
HDAC6-225ENST00000483506 ZNF813Q6ZN06 617 aa15.69■□□□□ 0.1
HDAC6-225ENST00000483506 DHFR2Q86XF0 187 aa15.69■□□□□ 0.1
HDAC6-225ENST00000483506 MEX3DQ86XN8 651 aaKnown RBP15.69■□□□□ 0.1
HDAC6-225ENST00000483506 OR4K5Q8NGD3 323 aa15.69■□□□□ 0.1
HDAC6-225ENST00000483506 OR13C2Q8NGS9 318 aa15.69■□□□□ 0.1
HDAC6-225ENST00000483506 NMD3Q96D46 503 aaKnown RBP15.69■□□□□ 0.1
HDAC6-225ENST00000483506 TNFRSF13CQ96RJ3 184 aa15.69■□□□□ 0.1
HDAC6-225ENST00000483506 GRIP2Q9C0E4 1043 aa15.69■□□□□ 0.1
HDAC6-225ENST00000483506 MAGIXQ9H6Y5 334 aa15.69■□□□□ 0.1
HDAC6-225ENST00000483506 B3GNT2Q9NY97 397 aa15.69■□□□□ 0.1
HDAC6-225ENST00000483506 POFUT2Q9Y2G5 429 aa15.69■□□□□ 0.1
HDAC6-225ENST00000483506 SH3PXD2BA1X283 911 aa15.68■□□□□ 0.1
HDAC6-225ENST00000483506 DHHO43323 396 aa15.68■□□□□ 0.1
HDAC6-225ENST00000483506 PTP4A3O75365 173 aa15.68■□□□□ 0.1
HDAC6-225ENST00000483506 CLRN1P58418 232 aa15.68■□□□□ 0.1
HDAC6-225ENST00000483506 RPL27P61353 136 aaKnown RBP15.68■□□□□ 0.1
HDAC6-225ENST00000483506 TUBA1BP68363 451 aa15.68■□□□□ 0.1
HDAC6-225ENST00000483506 TUBA4AP68366 448 aa15.68■□□□□ 0.1
HDAC6-225ENST00000483506 PGGHGQ32M88 737 aa15.68■□□□□ 0.1
HDAC6-225ENST00000483506 ZBED5Q49AG3 693 aa15.68■□□□□ 0.1
HDAC6-225ENST00000483506 DNAL1Q4LDG9 190 aa15.68■□□□□ 0.1
HDAC6-225ENST00000483506 C10orf128Q5T292 105 aa15.68■□□□□ 0.1
HDAC6-225ENST00000483506 TUBA1AQ71U36 451 aa15.68■□□□□ 0.1
HDAC6-225ENST00000483506 DTX2Q86UW9 622 aa15.68■□□□□ 0.1
HDAC6-225ENST00000483506 ZDHHC21Q8IVQ6 265 aa15.68■□□□□ 0.1
HDAC6-225ENST00000483506 PIAS4Q8N2W9 510 aaPredicted RBP15.68■□□□□ 0.1
HDAC6-225ENST00000483506 OR51A7Q8NH64 312 aa15.68■□□□□ 0.1
HDAC6-225ENST00000483506 SMAP2Q8WU79 429 aaPredicted RBP15.68■□□□□ 0.1
HDAC6-225ENST00000483506 MCHR2Q969V1 340 aa15.68■□□□□ 0.1
HDAC6-225ENST00000483506 SLC7A6OSQ96CW6 309 aaPredicted RBP15.68■□□□□ 0.1
HDAC6-225ENST00000483506 FAM46AQ96IP4 442 aaKnown RBP15.68■□□□□ 0.1
HDAC6-225ENST00000483506 GPX7Q96SL4 187 aaPredicted RBP15.68■□□□□ 0.1
HDAC6-225ENST00000483506 KCNK17Q96T54 332 aa15.68■□□□□ 0.1
HDAC6-225ENST00000483506 ALG12Q9BV10 488 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms