RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 RAP1AP62834 184 aa11.9□□□□□ -0.5
CPNE1-225ENST00000483495 PPP3R1P63098 170 aa11.9□□□□□ -0.5
CPNE1-225ENST00000483495 EGR3Q06889 387 aa11.9□□□□□ -0.5
CPNE1-225ENST00000483495 ZNF79Q15937 498 aa11.9□□□□□ -0.5
CPNE1-225ENST00000483495 CCDC157Q569K6 752 aa11.9□□□□□ -0.5
CPNE1-225ENST00000483495 FAM205BPQ63HN1 556 aa11.9□□□□□ -0.5
CPNE1-225ENST00000483495 UNQ9370/PRO34162Q6UXP9 181 aa11.9□□□□□ -0.5
CPNE1-225ENST00000483495 PLCZ1Q86YW0 608 aa11.9□□□□□ -0.5
CPNE1-225ENST00000483495 OR4K17Q8NGC6 315 aa11.9□□□□□ -0.5
CPNE1-225ENST00000483495 ASB10Q8WXI3 467 aa11.9□□□□□ -0.5
CPNE1-225ENST00000483495 ZBTB8AQ96BR9 441 aa11.9□□□□□ -0.5
CPNE1-225ENST00000483495 ADAD1Q96M93 576 aaKnown RBP11.9□□□□□ -0.5
CPNE1-225ENST00000483495 EDEM2Q9BV94 578 aa11.9□□□□□ -0.5
CPNE1-225ENST00000483495 MFRPQ9BY79 579 aa11.9□□□□□ -0.5
CPNE1-225ENST00000483495 PROK2Q9HC23 129 aa11.9□□□□□ -0.5
CPNE1-225ENST00000483495 TMEM9BQ9NQ34 198 aa11.9□□□□□ -0.5
CPNE1-225ENST00000483495 MRM2Q9UI43 246 aaKnown RBP11.9□□□□□ -0.5
CPNE1-225ENST00000483495 FARSAQ9Y285 508 aaKnown RBP11.9□□□□□ -0.5
CPNE1-225ENST00000483495 PCDHGA1Q9Y5H4 931 aa11.9□□□□□ -0.5
CPNE1-225ENST00000483495 WDFY4Q6ZS81 3184 aa11.9□□□□□ -0.51
CPNE1-225ENST00000483495 TRAV1-2A0A0B4J238 106 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 HSPB2A8KAH6 182 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 UPK3AO75631 287 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 NCR1O76036 304 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 TFPIP10646 304 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 MYL9P24844 172 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 EDNRAP25101 427 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 DAP3P51398 398 aaKnown RBP11.89□□□□□ -0.51
CPNE1-225ENST00000483495 RPS18P62269 152 aaKnown RBP11.89□□□□□ -0.51
CPNE1-225ENST00000483495 TLE3Q04726 772 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 MYBPHQ13203 477 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 EIF3IQ13347 325 aaKnown RBP11.89□□□□□ -0.51
CPNE1-225ENST00000483495 HSPB2Q16082 182 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 ZMAT1Q5H9K5 638 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 FAM27D1Q5T7N8 215 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 PRAMEF20Q5VT98 475 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 HBMQ6B0K9 141 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 NHLRC1Q6VVB1 395 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 OTOSQ8NHW6 89 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 SLC25A43Q8WUT9 341 aaPredicted RBP11.89□□□□□ -0.51
CPNE1-225ENST00000483495 ACOT12Q8WYK0 555 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 PHYHIPQ92561 330 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 KIAA1143Q96AT1 154 aaPredicted RBP11.89□□□□□ -0.51
CPNE1-225ENST00000483495 SRRQ9GZT4 340 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 SP140LQ9H930 580 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 LAMP5Q9UJQ1 280 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 KMT2EQ8IZD2 1858 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 CCDC187A0A096LP49 1063 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 H3BML4 177 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 SNPHO15079 494 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 SLC16A7O60669 478 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 MT-CO3P00414 261 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 UCHL1P09936 223 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 CCL3P10147 92 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 CTLA4P16410 223 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 CRABP1P29762 137 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 PSMB10P40306 273 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 CLDN6P56747 220 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 Q0VFX4 171 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 CDC20Q12834 499 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 SELENBP1Q13228 472 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 MELKQ14680 651 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 ZNF239Q16600 458 aaKnown RBP11.89□□□□□ -0.51
CPNE1-225ENST00000483495 SLC22A10Q63ZE4 541 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 H3F3CQ6NXT2 135 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 MZT2AQ6P582 158 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 DPY19L4Q7Z388 723 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 FAM220AQ7Z4H9 259 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 SLC22A16Q86VW1 577 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 OR13C5Q8NGS8 318 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 OR6N2Q8NGY6 317 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 KCTD12Q96CX2 325 aaKnown RBP11.89□□□□□ -0.51
CPNE1-225ENST00000483495 SOSTQ9BQB4 213 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 TTYH2Q9BSA4 534 aa11.89□□□□□ -0.51
CPNE1-225ENST00000483495 A0A0G2JK05 382 aa11.88□□□□□ -0.51
CPNE1-225ENST00000483495 NPIPA5E9PKD4 350 aa11.88□□□□□ -0.51
CPNE1-225ENST00000483495 ARL6IP5O75915 188 aa11.88□□□□□ -0.51
CPNE1-225ENST00000483495 KRT8P05787 483 aa11.88□□□□□ -0.51
CPNE1-225ENST00000483495 PSKH1P11801 424 aa11.88□□□□□ -0.51
CPNE1-225ENST00000483495 IFNGR1P15260 489 aa11.88□□□□□ -0.51
CPNE1-225ENST00000483495 OTX2P32243 289 aa11.88□□□□□ -0.51
CPNE1-225ENST00000483495 P2RY4P51582 365 aa11.88□□□□□ -0.51
CPNE1-225ENST00000483495 PSMD7P51665 324 aa11.88□□□□□ -0.51
CPNE1-225ENST00000483495 NANOS3P60323 173 aaKnown RBP11.88□□□□□ -0.51
CPNE1-225ENST00000483495 HSF1Q00613 529 aa11.88□□□□□ -0.51
CPNE1-225ENST00000483495 XKRXQ6PP77 449 aa11.88□□□□□ -0.51
CPNE1-225ENST00000483495 SLC35D2Q76EJ3 337 aa11.88□□□□□ -0.51
CPNE1-225ENST00000483495 KDM8Q8N371 416 aa11.88□□□□□ -0.51
CPNE1-225ENST00000483495 GTPBP8Q8N3Z3 284 aaPredicted RBP11.88□□□□□ -0.51
CPNE1-225ENST00000483495 RELTQ969Z4 430 aa11.88□□□□□ -0.51
CPNE1-225ENST00000483495 DIRAS2Q96HU8 199 aa11.88□□□□□ -0.51
CPNE1-225ENST00000483495 SGCZQ96LD1 299 aa11.88□□□□□ -0.51
CPNE1-225ENST00000483495 KCNK17Q96T54 332 aa11.88□□□□□ -0.51
CPNE1-225ENST00000483495 PDCD1LG2Q9BQ51 273 aa11.88□□□□□ -0.51
CPNE1-225ENST00000483495 MRPL22Q9NWU5 206 aaKnown RBP11.88□□□□□ -0.51
CPNE1-225ENST00000483495 HPF1Q9NWY4 346 aa11.88□□□□□ -0.51
CPNE1-225ENST00000483495 B3GAT1Q9P2W7 334 aa11.88□□□□□ -0.51
CPNE1-225ENST00000483495 COMMD3Q9UBI1 195 aa11.88□□□□□ -0.51
CPNE1-225ENST00000483495 NPIPA1Q9UND3 350 aa11.88□□□□□ -0.51
CPNE1-225ENST00000483495 RPH3AQ9Y2J0 694 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms