RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 MED31Q9Y3C7 131 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 IGHV4-30-2A0A087WSY4 118 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 C11orf98E9PRG8 122 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 hCG_2039718K7EN88 272 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 FBP2O00757 339 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 ATP8B1O43520 1251 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 SERPINI2O75830 405 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 SASH3O75995 380 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 HPRP00739 348 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 IFNW1P05000 195 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 B4GALT1P15291 398 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 PCMT1P22061 227 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 CBLP22681 906 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 NR4A1P22736 598 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 GLRXP35754 106 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 GUCA1AP43080 201 aaPredicted RBP9.93□□□□□ -0.82
CCM2-213ENST00000480658 PTDSS1P48651 473 aaKnown RBP9.93□□□□□ -0.82
CCM2-213ENST00000480658 PLP2Q04941 152 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 LGALS3BPQ08380 585 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 SNTB2Q13425 540 aaKnown RBP9.93□□□□□ -0.82
CCM2-213ENST00000480658 MOGQ16653 247 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 LRRC23Q53EV4 343 aaPredicted RBP9.93□□□□□ -0.82
CCM2-213ENST00000480658 RABL3Q5HYI8 236 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 FAM209AQ5JX71 171 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 C6orf52Q5T4I8 152 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 GKAP1Q5VSY0 366 aaPredicted RBP9.93□□□□□ -0.82
CCM2-213ENST00000480658 CYB5R2Q6BCY4 276 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 HIPK1Q86Z02 1210 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 CDK20Q8IZL9 346 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 TMEM239Q8WW34 195 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 TMEM54Q969K7 222 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 PRRC1Q96M27 445 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 VRK1Q99986 396 aaPredicted RBP9.93□□□□□ -0.82
CCM2-213ENST00000480658 EMC6Q9BV81 110 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 NOX3Q9HBY0 568 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 KRCC1Q9NPI7 259 aaPredicted RBP9.93□□□□□ -0.82
CCM2-213ENST00000480658 B3GNT2Q9NY97 397 aa9.93□□□□□ -0.82
CCM2-213ENST00000480658 BLOC1S5-TXNDC5H3BN57 136 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 M0R233 179 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 HAX1O00165 279 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 FXYD1O00168 92 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 KPNA4O00629 521 aaPredicted RBP9.92□□□□□ -0.82
CCM2-213ENST00000480658 NDUFS7O75251 213 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 GMNNO75496 209 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 SNAP29O95721 258 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 MT-ND5P03915 603 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 PGA4P0DJD7 388 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 PGA3P0DJD8 388 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 HLA-DOBP13765 273 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 ZNF14P17017 642 aaPredicted RBP9.92□□□□□ -0.82
CCM2-213ENST00000480658 KDELR2P33947 212 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 SLC9A3P48764 834 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 GZMMP51124 257 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 RAB1AP62820 205 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 SELENOWP63302 87 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 TBC1D28Q2M2D7 210 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 MST1LQ2TV78 715 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 VHLLQ6RSH7 139 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 DEF8Q6ZN54 512 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 SPATA21Q7Z572 469 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 CYP4Z1Q86W10 505 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 MICU2Q8IYU8 434 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 RNF113BQ8IZP6 322 aaKnown RBP9.92□□□□□ -0.82
CCM2-213ENST00000480658 SLC22A24Q8N4F4 322 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 NOXO1Q8NFA2 376 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 C10orf82Q8WW14 230 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 GEMIN6Q8WXD5 167 aaKnown RBP9.92□□□□□ -0.82
CCM2-213ENST00000480658 HPS1Q92902 700 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 CMTM5Q96DZ9 223 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 SGTBQ96EQ0 304 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 ZNF583Q96ND8 569 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 WACQ9BTA9 647 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 PRR14Q9BWN1 585 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 NSRP1Q9H0G5 558 aaKnown RBP9.92□□□□□ -0.82
CCM2-213ENST00000480658 ANKRD19PQ9H560 264 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 EFCAB1Q9HAE3 211 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 YAE1D1Q9NRH1 226 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 INIPQ9NRY2 104 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 TMEM38BQ9NVV0 291 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 TAS2R5Q9NYW4 299 aa9.92□□□□□ -0.82
CCM2-213ENST00000480658 NAV3Q8IVL0 2385 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 IQCMA0A1B0GVH7 501 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 DHHO43323 396 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 SYNGR3O43761 229 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 OR7A10O76100 309 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 HLA-HP01893 362 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 SERPINA5P05154 406 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 GIFP27352 417 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 CALCRP30988 508 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 THBS2P35442 1172 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 THBS4P35443 961 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 RAD52P43351 418 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 NR4A2P43354 598 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 GIPRP48546 466 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 CHN2P52757 468 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 TUBA1BP68363 451 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 TUBA4AP68366 448 aa9.91□□□□□ -0.82
CCM2-213ENST00000480658 MRPS11P82912 194 aaKnown RBP9.91□□□□□ -0.82
CCM2-213ENST00000480658 LSM11P83369 360 aaKnown RBP eCLIP9.91□□□□□ -0.82
CCM2-213ENST00000480658 KRTAP1-1Q07627 177 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms