RNA–Protein interactions for RNA: ENST00000479537.5

BRAF-203, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-203ENST00000479537 ERBINQ96RT1 1412 aa3.92□□□□□ -1.78
BRAF-203ENST00000479537 HEATR9A2RTY3 570 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 AGPAT2O15120 278 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 EMC8O43402 210 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 HCRTR1O43613 425 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 ERLIN1O75477 346 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 GAPDHP04406 335 aaKnown RBP3.91□□□□□ -1.78
BRAF-203ENST00000479537 TROVE2P10155 538 aaKnown RBP eCLIP3.91□□□□□ -1.78
BRAF-203ENST00000479537 CD1BP29016 333 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 KIR2DS4P43632 304 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 TAS2R19P59542 299 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 PRPS1P60891 318 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 BST2Q10589 180 aaKnown RBP3.91□□□□□ -1.78
BRAF-203ENST00000479537 GNMTQ14749 295 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 HERPUD1Q15011 391 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 EEA1Q15075 1411 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 TGFBIQ15582 683 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 ATP6AP1Q15904 470 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 PAGE3Q5JUK9 113 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 ZNF546Q86UE3 836 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 PSTKQ8IV42 348 aaKnown RBP3.91□□□□□ -1.78
BRAF-203ENST00000479537 NALCNQ8IZF0 1738 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 C6orf223Q8N319 242 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 TPRX1Q8N7U7 411 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 LINC01006Q8NI28 216 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 C7orf33Q8WU49 177 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 STMN2Q93045 179 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 UCN3Q969E3 161 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 RASD2Q96D21 266 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 PHYHIPLQ96FC7 376 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 ITCHQ96J02 903 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 HES7Q9BYE0 225 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 CTNNA3Q9UI47 895 aa3.91□□□□□ -1.78
BRAF-203ENST00000479537 USP9XQ93008 2570 aaPredicted RBP3.91□□□□□ -1.78
BRAF-203ENST00000479537 TOPAZ1Q8N9V7 1692 aa3.9□□□□□ -1.78
BRAF-203ENST00000479537 PHF3Q92576 2039 aaKnown RBP3.9□□□□□ -1.78
BRAF-203ENST00000479537 XRN1Q8IZH2 1706 aaKnown RBP3.9□□□□□ -1.78
BRAF-203ENST00000479537 ABCA3Q99758 1704 aa3.9□□□□□ -1.78
BRAF-203ENST00000479537 BCL9O00512 1426 aa3.9□□□□□ -1.78
BRAF-203ENST00000479537 NAIPQ13075 1403 aa3.9□□□□□ -1.78
BRAF-203ENST00000479537 FLNBO75369 2602 aaKnown RBP3.9□□□□□ -1.79
BRAF-203ENST00000479537 CCDC182A6NF36 153 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 ZNF716A6NP11 495 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 OR7A10O76100 309 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 SUPT7LO94864 414 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 KLF8O95600 359 aaPredicted RBP3.9□□□□□ -1.79
BRAF-203ENST00000479537 GIPP09681 153 aaPredicted RBP3.9□□□□□ -1.79
BRAF-203ENST00000479537 ZNF735P0CB33 412 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 FMO3P31513 532 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 HNRNPH3P31942 346 aaKnown RBP3.9□□□□□ -1.79
BRAF-203ENST00000479537 HSD17B2P37059 387 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 NDPQ00604 133 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 CUL2Q13617 745 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 HSP90AB3PQ58FF7 597 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 GPR157Q5UAW9 335 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 TMEM107Q6UX40 140 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 RNF165Q6ZSG1 346 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 PAQR7Q86WK9 346 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 CDR2LQ86X02 465 aaPredicted RBP3.9□□□□□ -1.79
BRAF-203ENST00000479537 CEP112Q8N8E3 955 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 OR6C4Q8NGE1 309 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 RPUSD4Q96CM3 377 aaKnown RBP3.9□□□□□ -1.79
BRAF-203ENST00000479537 HSFY1Q96LI6 401 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 PLEKHF1Q96S99 279 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 PELOQ9BRX2 385 aaKnown RBP3.9□□□□□ -1.79
BRAF-203ENST00000479537 NUP58Q9BVL2 599 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 ROGDIQ9GZN7 287 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 FAM192AQ9GZU8 254 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 NIPAL2Q9H841 368 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 MRPL47Q9HD33 250 aaKnown RBP3.9□□□□□ -1.79
BRAF-203ENST00000479537 PRR34Q9NV39 138 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 PSMC3IPQ9P2W1 217 aaPredicted RBP3.9□□□□□ -1.79
BRAF-203ENST00000479537 PISDQ9UG56 409 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 CDH10Q9Y6N8 788 aa3.9□□□□□ -1.79
BRAF-203ENST00000479537 ARHGEF5Q12774 1597 aa3.89□□□□□ -1.79
BRAF-203ENST00000479537 TP53BP1Q12888 1972 aaPredicted RBP3.89□□□□□ -1.79
BRAF-203ENST00000479537 CRB1P82279 1406 aa3.89□□□□□ -1.79
BRAF-203ENST00000479537 FAM231BA6NCW3 169 aa3.89□□□□□ -1.79
BRAF-203ENST00000479537 SGK1O00141 431 aa3.89□□□□□ -1.79
BRAF-203ENST00000479537 SERPIND1P05546 499 aa3.89□□□□□ -1.79
BRAF-203ENST00000479537 UBTFL1P0CB47 393 aaPredicted RBP3.89□□□□□ -1.79
BRAF-203ENST00000479537 TBPP20226 339 aa3.89□□□□□ -1.79
BRAF-203ENST00000479537 CMA1P23946 247 aa3.89□□□□□ -1.79
BRAF-203ENST00000479537 IFNA8P32881 189 aa3.89□□□□□ -1.79
BRAF-203ENST00000479537 ATP5C1P36542 298 aaKnown RBP3.89□□□□□ -1.79
BRAF-203ENST00000479537 PLP1P60201 277 aa3.89□□□□□ -1.79
BRAF-203ENST00000479537 KRTAP10-12P60413 245 aa3.89□□□□□ -1.79
BRAF-203ENST00000479537 LYZP61626 148 aa3.89□□□□□ -1.79
BRAF-203ENST00000479537 KCNJ2P63252 427 aa3.89□□□□□ -1.79
BRAF-203ENST00000479537 BEX3Q00994 111 aa3.89□□□□□ -1.79
BRAF-203ENST00000479537 ENPEPQ07075 957 aa3.89□□□□□ -1.79
BRAF-203ENST00000479537 ZNF79Q15937 498 aa3.89□□□□□ -1.79
BRAF-203ENST00000479537 DGUOKQ16854 277 aa3.89□□□□□ -1.79
BRAF-203ENST00000479537 ARMC12Q5T9G4 340 aa3.89□□□□□ -1.79
BRAF-203ENST00000479537 ZNF620Q6ZNG0 422 aa3.89□□□□□ -1.79
BRAF-203ENST00000479537 C11orf53Q8IXP5 236 aa3.89□□□□□ -1.79
BRAF-203ENST00000479537 ARPC1AQ92747 370 aa3.89□□□□□ -1.79
BRAF-203ENST00000479537 IMMP1LQ96LU5 166 aa3.89□□□□□ -1.79
BRAF-203ENST00000479537 KCNA7Q96RP8 456 aa3.89□□□□□ -1.79
BRAF-203ENST00000479537 CENPKQ9BS16 269 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms