RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 NELFAQ9H3P2 528 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 SMURF2Q9HAU4 748 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 RNF115Q9Y4L5 304 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 OTOGQ6ZRI0 2925 aa13.55□□□□□ -0.24
C9orf3-217ENST00000479161 TRBV4-1A0A0J9YWV2 114 aa13.54□□□□□ -0.24
C9orf3-217ENST00000479161 DPRXA6NFQ7 191 aa13.54□□□□□ -0.24
C9orf3-217ENST00000479161 GSC2O15499 205 aa13.54□□□□□ -0.24
C9orf3-217ENST00000479161 PIP5K1CO60331 668 aa13.54□□□□□ -0.24
C9orf3-217ENST00000479161 PTP4A3O75365 173 aa13.54□□□□□ -0.24
C9orf3-217ENST00000479161 RAF1P04049 648 aa13.54□□□□□ -0.24
C9orf3-217ENST00000479161 CD3EP07766 207 aa13.54□□□□□ -0.24
C9orf3-217ENST00000479161 CHRNB3Q05901 458 aa13.54□□□□□ -0.24
C9orf3-217ENST00000479161 LGALS3BPQ08380 585 aa13.54□□□□□ -0.24
C9orf3-217ENST00000479161 CAMK2DQ13557 499 aa13.54□□□□□ -0.24
C9orf3-217ENST00000479161 LAPTM4AQ15012 233 aa13.54□□□□□ -0.24
C9orf3-217ENST00000479161 ACKR1Q16570 336 aa13.54□□□□□ -0.24
C9orf3-217ENST00000479161 CEACAM16Q2WEN9 425 aa13.54□□□□□ -0.24
C9orf3-217ENST00000479161 FGD3Q5JSP0 725 aa13.54□□□□□ -0.24
C9orf3-217ENST00000479161 TBPL2Q6SJ96 375 aa13.54□□□□□ -0.24
C9orf3-217ENST00000479161 ZNF704Q6ZNC4 412 aaPredicted RBP13.54□□□□□ -0.24
C9orf3-217ENST00000479161 ZNF611Q8N823 705 aa13.54□□□□□ -0.24
C9orf3-217ENST00000479161 OR6N1Q8NGY5 312 aa13.54□□□□□ -0.24
C9orf3-217ENST00000479161 LRGUKQ96M69 825 aa13.54□□□□□ -0.24
C9orf3-217ENST00000479161 HS3ST6Q96QI5 342 aa13.54□□□□□ -0.24
C9orf3-217ENST00000479161 GPX7Q96SL4 187 aaPredicted RBP13.54□□□□□ -0.24
C9orf3-217ENST00000479161 ULBP2Q9BZM5 246 aa13.54□□□□□ -0.24
C9orf3-217ENST00000479161 SIGLEC7Q9Y286 467 aa13.54□□□□□ -0.24
C9orf3-217ENST00000479161 A6NIZ1 184 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 M0R3G1 203 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 CDC42EP2O14613 210 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 PDE5AO76074 875 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 IGKV3-15P01624 115 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 F13BP05160 661 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 RAP2AP10114 183 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 APEHP13798 732 aaKnown RBP13.53□□□□□ -0.24
C9orf3-217ENST00000479161 ACADSP16219 412 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 DNASE1P24855 282 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 RAP1BP61224 184 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 RPL27P61353 136 aaKnown RBP13.53□□□□□ -0.24
C9orf3-217ENST00000479161 RAP1AP62834 184 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 ARF1P84077 181 aaKnown RBP13.53□□□□□ -0.24
C9orf3-217ENST00000479161 BSPH1Q075Z2 132 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 SEC23BQ15437 767 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 PHYHD1Q5SRE7 291 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 C10orf128Q5T292 105 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 C1orf94Q6P1W5 598 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 LRFN4Q6PJG9 635 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 DPPA2Q7Z7J5 298 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 OR52N5Q8NH56 324 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 MOSPD2Q8NHP6 518 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 IGFBPL1Q8WX77 278 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 PIGTQ969N2 578 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 NMD3Q96D46 503 aaKnown RBP13.53□□□□□ -0.24
C9orf3-217ENST00000479161 ALPK1Q96QP1 1244 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 TNFRSF13CQ96RJ3 184 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 FOXC2Q99958 501 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 ALG12Q9BV10 488 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 GRIP2Q9C0E4 1043 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 CXXC4Q9H2H0 198 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 NPAP1Q9NZP6 1156 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 TMCC3Q9ULS5 477 aa13.53□□□□□ -0.24
C9orf3-217ENST00000479161 PRRC2AP48634 2157 aaKnown RBP13.52□□□□□ -0.24
C9orf3-217ENST00000479161 MCIDASD6RGH6 385 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 HS3ST1O14792 307 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 DIRAS1O95057 198 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 IGLV1-44P01699 117 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 CD14P08571 375 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 CBR1P16152 277 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 FPR3P25089 353 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 CD40P25942 277 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 RRM2P31350 389 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 UBE2NP61088 152 aaKnown RBP13.52□□□□□ -0.25
C9orf3-217ENST00000479161 SPIBQ01892 262 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 THEM4Q5T1C6 240 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 C9orf135Q5VTT2 229 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 GPR139Q6DWJ6 353 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 WDFY1Q8IWB7 410 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 ARIH2OSQ8N7S6 290 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 IL17RDQ8NFM7 739 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 OR51A7Q8NH64 312 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 ZNF837Q96EG3 531 aaPredicted RBP13.52□□□□□ -0.25
C9orf3-217ENST00000479161 CLPTM1LQ96KA5 538 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 KCNK17Q96T54 332 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 FOXB1Q99853 325 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 CADM1Q9BY67 442 aaKnown RBP13.52□□□□□ -0.25
C9orf3-217ENST00000479161 BEX4Q9NWD9 120 aaPredicted RBP13.52□□□□□ -0.25
C9orf3-217ENST00000479161 FBXL3Q9UKT7 428 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 AURKCQ9UQB9 309 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 POMPQ9Y244 141 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 POFUT2Q9Y2G5 429 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 LYVE1Q9Y5Y7 322 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 V9GYQ6 96 aa13.52□□□□□ -0.25
C9orf3-217ENST00000479161 DHHO43323 396 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 TRMUO75648 421 aaKnown RBP13.51□□□□□ -0.25
C9orf3-217ENST00000479161 SERPINI2O75830 405 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 NDUFB2O95178 105 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 ATE1O95260 518 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 PAX1P15863 534 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 CD53P19397 219 aa13.51□□□□□ -0.25
C9orf3-217ENST00000479161 ARR3P36575 388 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms