RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	PFN4	Q8NHR9	129 aa		11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	TMEM54	Q969K7	222 aa		11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	SLC25A44	Q96H78	314 aa	Predicted RBP	11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	DENND2D	Q9H6A0	471 aa	Predicted RBP	11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	MED31	Q9Y3C7	131 aa		11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	IGHV2OR16-5	A0A0B4J2B6	119 aa		11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937		B9A039	149 aa		11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	CXCR6	O00574	342 aa		11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	NME4	O00746	187 aa		11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	NDUFAB1	O14561	156 aa		11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	ENTPD5	O75356	428 aa		11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	F12	P00748	615 aa	Predicted RBP	11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	OR4A8	P0C604	315 aa		11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	NUDT2	P50583	147 aa		11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	HGFAC	Q04756	655 aa		11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	RPL18	Q07020	188 aa	Known RBP	11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	ADIPOQ	Q15848	244 aa		11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	HACD2	Q6Y1H2	254 aa		11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	HDDC2	Q7Z4H3	204 aa		11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	MYPOP	Q86VE0	399 aa	Predicted RBP	11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	OR10H5	Q8NGA6	315 aa		11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	LIPH	Q8WWY8	451 aa		11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	FAM168A	Q92567	244 aa		11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	CMTM5	Q96DZ9	223 aa		11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	PRRC1	Q96M27	445 aa		11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	C20orf141	Q9NUB4	165 aa		11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	GMPR2	Q9P2T1	348 aa	Known RBP	11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	FBXO9	Q9UK97	447 aa	Predicted RBP	11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	A4GNT	Q9UNA3	340 aa		11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	NAV3	Q8IVL0	2385 aa		11.97	□□□□□ -0.49
HDAC7-222	ENST00000477937	CSPG4	Q6UVK1	2322 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	IGHV4-30-2	A0A087WSY4	118 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	HTR3E	A5X5Y0	456 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	MCIDAS	D6RGH6	385 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	DHH	O43323	396 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	UBL3	O95164	117 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	ZNF682	O95780	498 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	IGHG1	P01857	330 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	IFNW1	P05000	195 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	F13B	P05160	661 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	QDPR	P09417	244 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	CSF3	P09919	207 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	PGA4	P0DJD7	388 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	PGA3	P0DJD8	388 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	NPR2	P20594	1047 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	PCSK6	P29122	969 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	AQP2	P41181	271 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	PTDSS1	P48651	473 aa	Known RBP	11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	SEC24C	P53992	1094 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	CLRN1	P58418	232 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	RAB1A	P62820	205 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	DAG1	Q14118	895 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	EFNB3	Q15768	340 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	C8orf82	Q6P1X6	216 aa	Predicted RBP	11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	LRFN4	Q6PJG9	635 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	VTCN1	Q7Z7D3	282 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	TREML1	Q86YW5	311 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	SLC22A24	Q8N4F4	322 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	ZNF525	Q8N782	197 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	VRK1	Q99986	396 aa	Predicted RBP	11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	FAM107B	Q9H098	131 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	NSRP1	Q9H0G5	558 aa	Known RBP	11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	ZNF442	Q9H7R0	627 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	INIP	Q9NRY2	104 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	FBXL3	Q9UKT7	428 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	FKBP7	Q9Y680	259 aa		11.96	□□□□□ -0.49
HDAC7-222	ENST00000477937	ZAN	Q9Y493	2812 aa		11.96	□□□□□ -0.5
HDAC7-222	ENST00000477937	HIVEP2	P31629	2446 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	CENPBD1	B2RD01	187 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	INAFM1	C9JVW0	142 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	FARS2	O95363	451 aa	Known RBP	11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	RAB36	O95755	333 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	TSPAN19	P0C672	248 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	OR8G3P	P0DMU2	310 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	ACADS	P16219	412 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	SLC25A16	P16260	332 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	ZNF14	P17017	642 aa	Predicted RBP	11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	THBS4	P35443	961 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	YAP1	P46937	504 aa	Known RBP	11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	GIPR	P48546	466 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	GSK3B	P49841	420 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	DAP3	P51398	398 aa	Known RBP	11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	LAPTM4A	Q15012	233 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	TRAM2	Q15035	370 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	HIST3H3	Q16695	136 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	FKBP9P1	Q75LS8	142 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	CBLL1	Q75N03	491 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	CPLX4	Q7Z7G2	160 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	GEMIN6	Q8WXD5	167 aa	Known RBP	11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	BPIFA2	Q96DR5	249 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	MS4A3	Q96HJ5	214 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	ZNF75A	Q96N20	296 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	SORCS2	Q96PQ0	1159 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	FNDC11	Q9BVV2	318 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	MRPL13	Q9BYD1	178 aa	Known RBP	11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	MYLK2	Q9H1R3	596 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	PLK3	Q9H4B4	646 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	NOX3	Q9HBY0	568 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	ZNF224	Q9NZL3	707 aa		11.95	□□□□□ -0.5
HDAC7-222	ENST00000477937	STX18	Q9P2W9	335 aa	Known RBP	11.95	□□□□□ -0.5

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