RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 KLHL21Q9UJP4 597 aa14.34□□□□□ -0.11
VHL-203ENST00000477538 HCFC1P51610 2035 aa14.34□□□□□ -0.11
VHL-203ENST00000477538 SMG1Q96Q15 3661 aaKnown RBP14.33□□□□□ -0.12
VHL-203ENST00000477538 LOC100130705A0A1B0GUX0 176 aa14.33□□□□□ -0.12
VHL-203ENST00000477538 SURF4O15260 269 aa14.33□□□□□ -0.12
VHL-203ENST00000477538 LRRTM2O43300 516 aa14.33□□□□□ -0.12
VHL-203ENST00000477538 IFNGP01579 166 aa14.33□□□□□ -0.12
VHL-203ENST00000477538 IGHG1P01857 330 aa14.33□□□□□ -0.12
VHL-203ENST00000477538 PGA4P0DJD7 388 aa14.33□□□□□ -0.12
VHL-203ENST00000477538 PGA3P0DJD8 388 aa14.33□□□□□ -0.12
VHL-203ENST00000477538 GGT2P36268 569 aa14.33□□□□□ -0.12
VHL-203ENST00000477538 OR3A2P47893 321 aa14.33□□□□□ -0.12
VHL-203ENST00000477538 CLRN1P58418 232 aa14.33□□□□□ -0.12
VHL-203ENST00000477538 RUNX1T1Q06455 604 aa14.33□□□□□ -0.12
VHL-203ENST00000477538 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.33□□□□□ -0.12
VHL-203ENST00000477538 PTCHD4Q6ZW05 846 aa14.33□□□□□ -0.12
VHL-203ENST00000477538 ADCK1Q86TW2 530 aa14.33□□□□□ -0.12
VHL-203ENST00000477538 SDR9C7Q8NEX9 313 aa14.33□□□□□ -0.12
VHL-203ENST00000477538 NOXO1Q8NFA2 376 aa14.33□□□□□ -0.12
VHL-203ENST00000477538 OR52E2Q8NGJ4 325 aa14.33□□□□□ -0.12
VHL-203ENST00000477538 OR4K13Q8NH42 304 aa14.33□□□□□ -0.12
VHL-203ENST00000477538 PLEKHA8Q96JA3 519 aa14.33□□□□□ -0.12
VHL-203ENST00000477538 CMC2Q9NRP2 79 aa14.33□□□□□ -0.12
VHL-203ENST00000477538 TVP23BQ9NYZ1 205 aa14.33□□□□□ -0.12
VHL-203ENST00000477538 NDRG4Q9ULP0 352 aaKnown RBP14.33□□□□□ -0.12
VHL-203ENST00000477538 GMPPBQ9Y5P6 360 aa14.33□□□□□ -0.12
VHL-203ENST00000477538 RIIAD1A6NNX1 92 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 CENPBD1B2RD01 187 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 H7C1C5 153 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 SLC16A6O15403 523 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 SLC2A10O95528 541 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 IL18BPO95998 194 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 EDNRAP25101 427 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 OPRM1P35372 400 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 CAPGP40121 348 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 CDKN2AP42771 156 aaKnown RBP14.32□□□□□ -0.12
VHL-203ENST00000477538 HSPA13P48723 471 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 CSNK1A1P48729 337 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 CDC42P60953 191 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 LCN6P62502 163 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 ADARB1P78563 741 aaKnown RBP14.32□□□□□ -0.12
VHL-203ENST00000477538 CD47Q08722 323 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 SNAPC1Q16533 368 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 TTC23Q5W5X9 447 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 MTFR2Q6P444 385 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 LEG1Q6P5S2 330 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 TFAP2EQ6VUC0 442 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 BTLAQ7Z6A9 289 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 CCDC71Q8IV32 467 aaPredicted RBP14.32□□□□□ -0.12
VHL-203ENST00000477538 SYT14Q8NB59 555 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 OR6N1Q8NGY5 312 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 FAM81AQ8TBF8 368 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 STARD4Q96DR4 205 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 CCDC120Q96HB5 630 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 KCNK17Q96T54 332 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 NMNAT3Q96T66 252 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 ALG12Q9BV10 488 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 MRPL13Q9BYD1 178 aaKnown RBP14.32□□□□□ -0.12
VHL-203ENST00000477538 SLCO5A1Q9H2Y9 848 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 PROCRQ9UNN8 238 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 RNF6Q9Y252 685 aa14.32□□□□□ -0.12
VHL-203ENST00000477538 SPTBN1Q01082 2364 aaKnown RBP14.32□□□□□ -0.12
VHL-203ENST00000477538 PRSS37A4D1T9 235 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 OR6C65A6NJZ3 312 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 H0YAE9 185 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 M0R129 80 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 SMNDC1O75940 238 aaKnown RBP eCLIP14.31□□□□□ -0.12
VHL-203ENST00000477538 RENP00797 406 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 IGHV3-9P01782 118 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 ZNF3P17036 446 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 BMP5P22003 454 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 ADORA2A-AS1P86434 159 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 LGALS3BPQ08380 585 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 KEAP1Q14145 624 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 CRMP1Q14194 572 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 ZNF362Q5T0B9 420 aaPredicted RBP14.31□□□□□ -0.12
VHL-203ENST00000477538 TSPO2Q5TGU0 170 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 C20orf196Q8IYI0 205 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 GPR137CQ8N3F9 429 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 POMGNT2Q8NAT1 580 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 CYB561A3Q8NBI2 242 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 SLC37A3Q8NCC5 494 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 TMEM54Q969K7 222 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 LRR1Q96L50 414 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 SNX18Q96RF0 628 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 PLSCR4Q9NRQ2 329 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 SLC7A10Q9NS82 523 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 IMPAD1Q9NX62 359 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 GLTPQ9NZD2 209 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 VSX1Q9NZR4 365 aaPredicted RBP14.31□□□□□ -0.12
VHL-203ENST00000477538 ZNF629Q9UEG4 869 aaPredicted RBP14.31□□□□□ -0.12
VHL-203ENST00000477538 PRSS50Q9UI38 385 aa14.31□□□□□ -0.12
VHL-203ENST00000477538 FOXD3Q9UJU5 478 aaPredicted RBP14.31□□□□□ -0.12
VHL-203ENST00000477538 SLC22A23A1A5C7 686 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 M0R3G1 203 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 DVL2O14641 736 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 AHCYL1O43865 530 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 UPK3AO75631 287 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 KRT33AO76009 404 aa14.3□□□□□ -0.12
VHL-203ENST00000477538 CGAP01215 116 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms