RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 GPR137CQ8N3F9 429 aa14.86□□□□□ -0.03
SCAF11-206ENST00000474828 CLDN22Q8N7P3 220 aa14.86□□□□□ -0.03
SCAF11-206ENST00000474828 WDR31Q8NA23 367 aa14.86□□□□□ -0.03
SCAF11-206ENST00000474828 OR1K1Q8NGR3 316 aa14.86□□□□□ -0.03
SCAF11-206ENST00000474828 GNPDA2Q8TDQ7 276 aa14.86□□□□□ -0.03
SCAF11-206ENST00000474828 BCL2L2Q92843 193 aaPredicted RBP14.86□□□□□ -0.03
SCAF11-206ENST00000474828 ZNF566Q969W8 418 aa14.86□□□□□ -0.03
SCAF11-206ENST00000474828 ZNF837Q96EG3 531 aaPredicted RBP14.86□□□□□ -0.03
SCAF11-206ENST00000474828 ALKBH3Q96Q83 286 aaPredicted RBP14.86□□□□□ -0.03
SCAF11-206ENST00000474828 SMURF2Q9HAU4 748 aa14.86□□□□□ -0.03
SCAF11-206ENST00000474828 OBP2BQ9NPH6 170 aa14.86□□□□□ -0.03
SCAF11-206ENST00000474828 RASSF1Q9NS23 344 aa14.86□□□□□ -0.03
SCAF11-206ENST00000474828 GLTPQ9NZD2 209 aa14.86□□□□□ -0.03
SCAF11-206ENST00000474828 SAMHD1Q9Y3Z3 626 aaKnown RBP14.86□□□□□ -0.03
SCAF11-206ENST00000474828 SLC25A15Q9Y619 301 aa14.86□□□□□ -0.03
SCAF11-206ENST00000474828 ARPC4-TTLL3A0A0A6YYG9 625 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 UNC119BA6NIH7 251 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 ZNF99A8MXY4 864 aaPredicted RBP14.85□□□□□ -0.03
SCAF11-206ENST00000474828 MCIDASD6RGH6 385 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 AHCYL1O43865 530 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 IGHG1P01857 330 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 ACADSP16219 412 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 CTXN1P60606 82 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 IL1RL1Q01638 556 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 CAMK2DQ13557 499 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 RFX4Q33E94 735 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 NRN1LQ496H8 165 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 C10orf128Q5T292 105 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 ANKRD16Q6P6B7 361 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 SMARCD3Q6STE5 483 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 THSD4Q6ZMP0 1018 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 DPY19L2P2Q6ZN68 376 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 ARIH2OSQ8N7S6 290 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 NRBF2Q96F24 287 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 TSPAN32Q96QS1 320 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 TMEM204Q9BSN7 226 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 ALG12Q9BV10 488 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 CRLF2Q9HC73 371 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 SLC17A5Q9NRA2 495 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 IL20Q9NYY1 176 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 ZNF346Q9UL40 294 aaKnown RBP14.85□□□□□ -0.03
SCAF11-206ENST00000474828 CACNA1DQ01668 2161 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 ALPK2Q86TB3 2170 aa14.85□□□□□ -0.03
SCAF11-206ENST00000474828 IMPA2O14732 288 aa14.84□□□□□ -0.03
SCAF11-206ENST00000474828 ARPC3O15145 178 aa14.84□□□□□ -0.03
SCAF11-206ENST00000474828 TRMUO75648 421 aaKnown RBP14.84□□□□□ -0.03
SCAF11-206ENST00000474828 CCNB2O95067 398 aa14.84□□□□□ -0.03
SCAF11-206ENST00000474828 GASTP01350 101 aa14.84□□□□□ -0.03
SCAF11-206ENST00000474828 CSNK1A1P48729 337 aa14.84□□□□□ -0.03
SCAF11-206ENST00000474828 TLE4Q04727 773 aa14.84□□□□□ -0.03
SCAF11-206ENST00000474828 MELKQ14680 651 aa14.84□□□□□ -0.03
SCAF11-206ENST00000474828 GPR139Q6DWJ6 353 aa14.84□□□□□ -0.03
SCAF11-206ENST00000474828 ZNF620Q6ZNG0 422 aa14.84□□□□□ -0.03
SCAF11-206ENST00000474828 TMEM179BQ7Z7N9 219 aa14.84□□□□□ -0.03
SCAF11-206ENST00000474828 FAM169BQ8N8A8 192 aa14.84□□□□□ -0.03
SCAF11-206ENST00000474828 NOXO1Q8NFA2 376 aa14.84□□□□□ -0.03
SCAF11-206ENST00000474828 OR9Q2Q8NGE9 314 aa14.84□□□□□ -0.03
SCAF11-206ENST00000474828 FNDC8Q8TC99 324 aa14.84□□□□□ -0.03
SCAF11-206ENST00000474828 HDAC2Q92769 488 aaKnown RBP14.84□□□□□ -0.03
SCAF11-206ENST00000474828 KATNB1Q9BVA0 655 aa14.84□□□□□ -0.03
SCAF11-206ENST00000474828 B3GAT2Q9NPZ5 323 aa14.84□□□□□ -0.03
SCAF11-206ENST00000474828 MGAT4BQ9UQ53 548 aa14.84□□□□□ -0.03
SCAF11-206ENST00000474828 PDZD2O15018 2839 aa14.84□□□□□ -0.03
SCAF11-206ENST00000474828 ABCA12Q86UK0 2595 aa14.84□□□□□ -0.03
SCAF11-206ENST00000474828 LRBAP50851 2863 aa14.83□□□□□ -0.03
SCAF11-206ENST00000474828 CIB4A0PJX0 185 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 A6NIZ1 184 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 M0R3G1 203 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 MGRN1O60291 552 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 RAD51DO75771 328 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 SERPINI2O75830 405 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 CIB2O75838 187 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 TP53P04637 393 aaPredicted RBP14.83□□□□□ -0.04
SCAF11-206ENST00000474828 RAP1BP61224 184 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 RAP1AP62834 184 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 ARF1P84077 181 aaKnown RBP14.83□□□□□ -0.04
SCAF11-206ENST00000474828 COX10Q12887 443 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 PPP1R8Q12972 351 aaKnown RBP14.83□□□□□ -0.04
SCAF11-206ENST00000474828 PPA1Q15181 289 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 ATP6AP1Q15904 470 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 CEACAM16Q2WEN9 425 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 C3orf36Q3SXR2 165 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 TBRG1Q3YBR2 411 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 HMBOX1Q6NT76 420 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 RPL13AP3Q6NVV1 102 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 RASSF6Q6ZTQ3 369 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 CCDC36Q8IYA8 594 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 ULBP2Q9BZM5 246 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 NDEL1Q9GZM8 345 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 OR52D1Q9H346 318 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 CRNNQ9UBG3 495 aaPredicted RBP14.83□□□□□ -0.04
SCAF11-206ENST00000474828 AMDHD2Q9Y303 409 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 AP4S1Q9Y587 144 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 U3KQV3 271 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 MYO9AB2RTY4 2548 aa14.83□□□□□ -0.04
SCAF11-206ENST00000474828 CREBBPQ92793 2442 aa14.82□□□□□ -0.04
SCAF11-206ENST00000474828 CASKO14936 926 aa14.82□□□□□ -0.04
SCAF11-206ENST00000474828 DEAF1O75398 565 aaPredicted RBP14.82□□□□□ -0.04
SCAF11-206ENST00000474828 KRT33AO76009 404 aa14.82□□□□□ -0.04
SCAF11-206ENST00000474828 NR2C1P13056 603 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms