RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 ZC3H13Q5T200 1668 aaKnown RBP3.15□□□□□ -1.91
UBR3-208ENST00000474426 PLEKHH2Q8IVE3 1493 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 TMEM72A0PK05 275 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 SMCO3A2RU48 225 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 CPED1A4D0V7 1026 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 MYMKA6NI61 221 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 AIPO00170 330 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 IFNA7P01567 189 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 ALDOCP09972 364 aaKnown RBP3.15□□□□□ -1.91
UBR3-208ENST00000474426 RPL10P27635 214 aaKnown RBP3.15□□□□□ -1.91
UBR3-208ENST00000474426 SRD5A2P31213 254 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 GNG3P63215 75 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 CDK5Q00535 292 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 EXOSC2Q13868 293 aaKnown RBP3.15□□□□□ -1.91
UBR3-208ENST00000474426 LDLRAD2Q5SZI1 272 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 RGMBQ6NW40 437 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 FAAP20Q6NZ36 180 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 B3GLCTQ6Y288 498 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 SLC36A1Q7Z2H8 476 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 ZNF664Q8N3J9 261 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 MDGA1Q8NFP4 955 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 OR10S1Q8NGN2 331 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 OR14K1Q8NGZ2 314 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 WDR20Q8TBZ3 569 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 RAD54LQ92698 747 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 FAM131CQ96AQ9 280 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 ORAI1Q96D31 301 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 RBP7Q96R05 134 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 MYADMQ96S97 322 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 SLC29A3Q9BZD2 475 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 LAT2Q9GZY6 243 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 NAA50Q9GZZ1 169 aaKnown RBP3.15□□□□□ -1.91
UBR3-208ENST00000474426 CLDND1Q9NY35 253 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 VPS29Q9UBQ0 182 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 UBQLN1Q9UMX0 589 aaKnown RBP3.15□□□□□ -1.91
UBR3-208ENST00000474426 TNFSF18Q9UNG2 199 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 TFR2Q9UP52 801 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 C14orf166Q9Y224 244 aaKnown RBP3.15□□□□□ -1.91
UBR3-208ENST00000474426 HSPB11Q9Y547 144 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 FOCADQ5VW36 1801 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 ARAP3Q8WWN8 1544 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 PNPLA7Q6ZV29 1317 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 ABCC8Q09428 1581 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 MROH2BQ7Z745 1585 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 FAM187AA6NFU0 413 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 TCP10L2B9ZVM9 353 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 NPIPB9F8W1W9 429 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 TRAPPC2LH3BP13 241 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 CORTO00230 105 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 MANBAO00462 879 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 MRASO14807 208 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 PRKAB2O43741 272 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 EDF1O60869 148 aaKnown RBP3.15□□□□□ -1.91
UBR3-208ENST00000474426 AMBPP02760 352 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 BCHEP06276 602 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 LYL1P12980 280 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 EPHA1P21709 976 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 SLC6A9P48067 706 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 CTSCP53634 463 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 TMBIM6P55061 237 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 ZNF200P98182 395 aaPredicted RBP3.15□□□□□ -1.91
UBR3-208ENST00000474426 OR5I1Q13606 314 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 KIAA0141Q14154 515 aaPredicted RBP3.15□□□□□ -1.91
UBR3-208ENST00000474426 DOC2BQ14184 412 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 NECTIN1Q15223 517 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 RSU1Q15404 277 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 CDO1Q16878 200 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 FAM153CQ494X1 144 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 TFDP3Q5H9I0 405 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 C1orf220Q5T0J3 134 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 OGFRL1Q5TC84 451 aaPredicted RBP3.15□□□□□ -1.91
UBR3-208ENST00000474426 ADAM5Q6NVV9 412 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 FAM159AQ6UWV7 190 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 RASSF6Q6ZTQ3 369 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 HSD17B13Q7Z5P4 300 aaPredicted RBP3.15□□□□□ -1.91
UBR3-208ENST00000474426 UEVLDQ8IX04 471 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 ACBD7Q8N6N7 88 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 DNAJC5GQ8N7S2 189 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 ATP6V1C2Q8NEY4 427 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 OR13C4Q8NGS5 318 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 COQ8AQ8NI60 647 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 M1APQ8TC57 530 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 BAALCQ8WXS3 180 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 MAGOHBQ96A72 148 aaKnown RBP3.15□□□□□ -1.91
UBR3-208ENST00000474426 ZG16BQ96DA0 208 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 C16orf92Q96LL3 132 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 OR52E6Q96RD3 313 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 FAAP24Q9BTP7 215 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 HDAC8Q9BY41 377 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 CDIP1Q9H305 208 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 Q9H521 79 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 METTL17Q9H7H0 456 aaPredicted RBP3.15□□□□□ -1.91
UBR3-208ENST00000474426 FGF21Q9NSA1 209 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 ANKRD10Q9NXR5 420 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 FBXL7Q9UJT9 491 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 CDH10Q9Y6N8 788 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 NALCNQ8IZF0 1738 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 SNAPC4Q5SXM2 1469 aa3.15□□□□□ -1.91
UBR3-208ENST00000474426 LAMC1P11047 1609 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 A0A0U1RQF3 1178 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms